Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07665 and BWI76_RS07670 are separated by 133 nucleotides BWI76_RS07670 and BWI76_RS07675 are separated by 363 nucleotides
BWI76_RS07665: BWI76_RS07665 - ABC transporter substrate-binding protein, at 1,623,071 to 1,624,006
_RS07665
BWI76_RS07670: BWI76_RS07670 - carbohydrate kinase, at 1,624,140 to 1,625,660
_RS07670
BWI76_RS07675: BWI76_RS07675 - DeoR family transcriptional regulator, at 1,626,024 to 1,626,974
_RS07675
Position (kb)
1624
1625
1626 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1623.207 kb on + strand, within BWI76_RS07665 at 1623.215 kb on - strand, within BWI76_RS07665 at 1623.288 kb on + strand, within BWI76_RS07665 at 1623.306 kb on - strand, within BWI76_RS07665 at 1623.397 kb on + strand, within BWI76_RS07665 at 1623.397 kb on + strand, within BWI76_RS07665 at 1623.405 kb on - strand, within BWI76_RS07665 at 1623.405 kb on - strand, within BWI76_RS07665 at 1623.451 kb on + strand, within BWI76_RS07665 at 1623.459 kb on - strand, within BWI76_RS07665 at 1623.464 kb on + strand, within BWI76_RS07665 at 1623.464 kb on + strand, within BWI76_RS07665 at 1623.464 kb on + strand, within BWI76_RS07665 at 1623.464 kb on + strand, within BWI76_RS07665 at 1623.464 kb on + strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.472 kb on - strand, within BWI76_RS07665 at 1623.510 kb on - strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.521 kb on + strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.529 kb on - strand, within BWI76_RS07665 at 1623.535 kb on + strand, within BWI76_RS07665 at 1623.543 kb on - strand, within BWI76_RS07665 at 1623.606 kb on - strand, within BWI76_RS07665 at 1623.671 kb on + strand, within BWI76_RS07665 at 1623.726 kb on + strand, within BWI76_RS07665 at 1623.734 kb on - strand, within BWI76_RS07665 at 1623.746 kb on - strand, within BWI76_RS07665 at 1623.746 kb on - strand, within BWI76_RS07665 at 1623.746 kb on - strand, within BWI76_RS07665 at 1623.746 kb on - strand at 1623.751 kb on - strand, within BWI76_RS07665 at 1623.756 kb on - strand, within BWI76_RS07665 at 1623.756 kb on - strand, within BWI76_RS07665 at 1623.870 kb on + strand, within BWI76_RS07665 at 1623.894 kb on + strand, within BWI76_RS07665 at 1623.894 kb on + strand, within BWI76_RS07665 at 1623.919 kb on + strand at 1623.949 kb on - strand at 1623.970 kb on + strand at 1623.970 kb on + strand at 1623.970 kb on + strand at 1623.978 kb on - strand at 1623.978 kb on - strand at 1623.978 kb on - strand at 1623.978 kb on - strand at 1624.041 kb on - strand at 1624.052 kb on + strand at 1624.110 kb on - strand at 1624.168 kb on + strand at 1624.176 kb on - strand at 1624.176 kb on - strand at 1624.181 kb on - strand at 1624.321 kb on - strand, within BWI76_RS07670 at 1624.334 kb on + strand, within BWI76_RS07670 at 1624.355 kb on + strand, within BWI76_RS07670 at 1624.378 kb on + strand, within BWI76_RS07670 at 1624.378 kb on + strand, within BWI76_RS07670 at 1624.386 kb on - strand, within BWI76_RS07670 at 1624.386 kb on - strand, within BWI76_RS07670 at 1624.396 kb on - strand, within BWI76_RS07670 at 1624.396 kb on - strand, within BWI76_RS07670 at 1624.697 kb on + strand, within BWI76_RS07670 at 1624.932 kb on - strand, within BWI76_RS07670 at 1625.003 kb on + strand, within BWI76_RS07670 at 1625.010 kb on - strand, within BWI76_RS07670 at 1625.165 kb on - strand, within BWI76_RS07670 at 1625.253 kb on - strand, within BWI76_RS07670 at 1625.289 kb on - strand, within BWI76_RS07670 at 1625.305 kb on - strand, within BWI76_RS07670 at 1625.501 kb on - strand, within BWI76_RS07670 at 1625.503 kb on + strand, within BWI76_RS07670 at 1625.740 kb on - strand at 1625.883 kb on - strand at 1626.201 kb on + strand, within BWI76_RS07675 at 1626.433 kb on - strand, within BWI76_RS07675 at 1626.445 kb on - strand, within BWI76_RS07675
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 1,623,207 + BWI76_RS07665 0.15 -0.3 1,623,215 - BWI76_RS07665 0.15 -0.1 1,623,288 + BWI76_RS07665 0.23 +0.2 1,623,306 - BWI76_RS07665 0.25 +1.2 1,623,397 + BWI76_RS07665 0.35 +2.3 1,623,397 + BWI76_RS07665 0.35 -2.7 1,623,405 - BWI76_RS07665 0.36 -0.6 1,623,405 - BWI76_RS07665 0.36 -0.0 1,623,451 + BWI76_RS07665 0.41 -0.8 1,623,459 - BWI76_RS07665 0.41 +0.2 1,623,464 + BWI76_RS07665 0.42 -0.0 1,623,464 + BWI76_RS07665 0.42 -0.9 1,623,464 + BWI76_RS07665 0.42 -2.5 1,623,464 + BWI76_RS07665 0.42 -2.0 1,623,464 + BWI76_RS07665 0.42 -2.3 1,623,472 - BWI76_RS07665 0.43 +0.2 1,623,472 - BWI76_RS07665 0.43 -0.3 1,623,472 - BWI76_RS07665 0.43 +0.1 1,623,472 - BWI76_RS07665 0.43 +1.0 1,623,472 - BWI76_RS07665 0.43 +0.4 1,623,472 - BWI76_RS07665 0.43 +0.7 1,623,472 - BWI76_RS07665 0.43 +0.7 1,623,472 - BWI76_RS07665 0.43 +1.1 1,623,472 - BWI76_RS07665 0.43 -0.1 1,623,510 - BWI76_RS07665 0.47 -0.2 1,623,521 + BWI76_RS07665 0.48 -1.4 1,623,521 + BWI76_RS07665 0.48 +0.1 1,623,521 + BWI76_RS07665 0.48 +0.5 1,623,521 + BWI76_RS07665 0.48 +0.6 1,623,521 + BWI76_RS07665 0.48 +0.2 1,623,521 + BWI76_RS07665 0.48 -1.3 1,623,521 + BWI76_RS07665 0.48 -0.8 1,623,521 + BWI76_RS07665 0.48 +1.6 1,623,521 + BWI76_RS07665 0.48 -0.5 1,623,529 - BWI76_RS07665 0.49 -0.7 1,623,529 - BWI76_RS07665 0.49 +0.8 1,623,529 - BWI76_RS07665 0.49 +0.5 1,623,529 - BWI76_RS07665 0.49 +1.3 1,623,529 - BWI76_RS07665 0.49 -0.9 1,623,529 - BWI76_RS07665 0.49 -0.9 1,623,529 - BWI76_RS07665 0.49 -0.3 1,623,535 + BWI76_RS07665 0.50 +1.2 1,623,543 - BWI76_RS07665 0.50 -0.4 1,623,606 - BWI76_RS07665 0.57 -0.8 1,623,671 + BWI76_RS07665 0.64 -0.1 1,623,726 + BWI76_RS07665 0.70 -0.1 1,623,734 - BWI76_RS07665 0.71 -0.4 1,623,746 - BWI76_RS07665 0.72 -0.1 1,623,746 - BWI76_RS07665 0.72 -0.3 1,623,746 - BWI76_RS07665 0.72 -1.2 1,623,746 - +0.0 1,623,751 - BWI76_RS07665 0.73 -0.4 1,623,756 - BWI76_RS07665 0.73 +2.0 1,623,756 - BWI76_RS07665 0.73 -0.5 1,623,870 + BWI76_RS07665 0.85 -0.3 1,623,894 + BWI76_RS07665 0.88 +0.3 1,623,894 + BWI76_RS07665 0.88 -0.5 1,623,919 + -0.3 1,623,949 - -0.4 1,623,970 + -0.8 1,623,970 + +0.2 1,623,970 + +0.5 1,623,978 - -3.0 1,623,978 - +0.5 1,623,978 - -1.0 1,623,978 - -0.6 1,624,041 - +0.9 1,624,052 + -1.7 1,624,110 - +0.4 1,624,168 + -0.4 1,624,176 - +1.3 1,624,176 - +2.2 1,624,181 - -1.3 1,624,321 - BWI76_RS07670 0.12 +0.7 1,624,334 + BWI76_RS07670 0.13 +0.3 1,624,355 + BWI76_RS07670 0.14 -1.5 1,624,378 + BWI76_RS07670 0.16 +0.4 1,624,378 + BWI76_RS07670 0.16 +0.5 1,624,386 - BWI76_RS07670 0.16 +1.3 1,624,386 - BWI76_RS07670 0.16 -0.8 1,624,396 - BWI76_RS07670 0.17 -0.5 1,624,396 - BWI76_RS07670 0.17 -0.5 1,624,697 + BWI76_RS07670 0.37 +0.7 1,624,932 - BWI76_RS07670 0.52 -1.4 1,625,003 + BWI76_RS07670 0.57 -0.5 1,625,010 - BWI76_RS07670 0.57 +0.8 1,625,165 - BWI76_RS07670 0.67 +0.7 1,625,253 - BWI76_RS07670 0.73 -0.1 1,625,289 - BWI76_RS07670 0.76 +1.4 1,625,305 - BWI76_RS07670 0.77 +0.6 1,625,501 - BWI76_RS07670 0.89 -1.3 1,625,503 + BWI76_RS07670 0.90 +2.4 1,625,740 - -0.1 1,625,883 - +0.8 1,626,201 + BWI76_RS07675 0.19 +0.3 1,626,433 - BWI76_RS07675 0.43 +0.2 1,626,445 - BWI76_RS07675 0.44 +0.1
Or see this region's nucleotide sequence