Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06950

Experiment: K. M5a1 KLEB23 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06940 and BWI76_RS06945 are separated by 28 nucleotidesBWI76_RS06945 and BWI76_RS06950 overlap by 63 nucleotidesBWI76_RS06950 and BWI76_RS06955 overlap by 4 nucleotides BWI76_RS06940: BWI76_RS06940 - short-chain dehydrogenase/reductase, at 1,457,557 to 1,458,327 _RS06940 BWI76_RS06945: BWI76_RS06945 - multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1, at 1,458,356 to 1,459,012 _RS06945 BWI76_RS06950: BWI76_RS06950 - ABC transporter ATP-binding protein, at 1,458,950 to 1,459,636 _RS06950 BWI76_RS06955: BWI76_RS06955 - sugar ABC transporter permease, at 1,459,633 to 1,462,050 _RS06955 Position (kb) 1458 1459 1460Strain fitness (log2 ratio) -2 -1 0 1at 1458.251 kb on - strandat 1458.371 kb on + strandat 1458.371 kb on + strandat 1458.523 kb on + strand, within BWI76_RS06945at 1458.523 kb on + strand, within BWI76_RS06945at 1458.550 kb on + strand, within BWI76_RS06945at 1458.679 kb on + strand, within BWI76_RS06945at 1458.819 kb on + strand, within BWI76_RS06945at 1458.827 kb on - strand, within BWI76_RS06945at 1459.254 kb on + strand, within BWI76_RS06950at 1459.345 kb on - strand, within BWI76_RS06950at 1459.445 kb on + strand, within BWI76_RS06950at 1459.816 kb on - strandat 1459.821 kb on - strandat 1459.849 kb on + strandat 1459.993 kb on - strand, within BWI76_RS06955at 1460.075 kb on + strand, within BWI76_RS06955at 1460.075 kb on + strand, within BWI76_RS06955at 1460.123 kb on + strand, within BWI76_RS06955at 1460.321 kb on + strand, within BWI76_RS06955

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1
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1,458,251 - -0.0
1,458,371 + -0.1
1,458,371 + -0.1
1,458,523 + BWI76_RS06945 0.25 +0.8
1,458,523 + BWI76_RS06945 0.25 -0.5
1,458,550 + BWI76_RS06945 0.30 +0.3
1,458,679 + BWI76_RS06945 0.49 +0.9
1,458,819 + BWI76_RS06945 0.70 +0.0
1,458,827 - BWI76_RS06945 0.72 +0.7
1,459,254 + BWI76_RS06950 0.44 +0.1
1,459,345 - BWI76_RS06950 0.57 -0.9
1,459,445 + BWI76_RS06950 0.72 -1.8
1,459,816 - -0.6
1,459,821 - +0.0
1,459,849 + -0.4
1,459,993 - BWI76_RS06955 0.15 -0.4
1,460,075 + BWI76_RS06955 0.18 -0.0
1,460,075 + BWI76_RS06955 0.18 -0.3
1,460,123 + BWI76_RS06955 0.20 -0.4
1,460,321 + BWI76_RS06955 0.28 +0.5

Or see this region's nucleotide sequence