Experiment: K. M5a1 KLEB23 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02005 and BWI76_RS02010 are separated by 36 nucleotides BWI76_RS02010 and BWI76_RS02015 are separated by 151 nucleotides BWI76_RS02015 and BWI76_RS02020 are separated by 146 nucleotides
BWI76_RS02005: BWI76_RS02005 - glutathione S-transferase, at 411,855 to 412,523
_RS02005
BWI76_RS02010: BWI76_RS02010 - hypothetical protein, at 412,560 to 412,760
_RS02010
BWI76_RS02015: BWI76_RS02015 - NCS2 family permease, at 412,912 to 414,261
_RS02015
BWI76_RS02020: BWI76_RS02020 - Na+/H+ antiporter, at 414,408 to 416,054
_RS02020
Position (kb) 412
413
414
415 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 411.943 kb on - strand, within BWI76_RS02005 at 411.951 kb on - strand, within BWI76_RS02005 at 411.953 kb on + strand, within BWI76_RS02005 at 411.959 kb on + strand, within BWI76_RS02005 at 412.056 kb on + strand, within BWI76_RS02005 at 412.078 kb on + strand, within BWI76_RS02005 at 412.085 kb on - strand, within BWI76_RS02005 at 412.145 kb on + strand, within BWI76_RS02005 at 412.150 kb on + strand, within BWI76_RS02005 at 412.213 kb on - strand, within BWI76_RS02005 at 412.253 kb on + strand, within BWI76_RS02005 at 412.261 kb on - strand, within BWI76_RS02005 at 412.285 kb on - strand, within BWI76_RS02005 at 412.322 kb on + strand, within BWI76_RS02005 at 412.461 kb on - strand at 412.463 kb on + strand at 412.863 kb on - strand at 413.015 kb on + strand at 413.016 kb on - strand at 413.130 kb on + strand, within BWI76_RS02015 at 413.138 kb on - strand, within BWI76_RS02015 at 413.390 kb on + strand, within BWI76_RS02015 at 413.769 kb on + strand at 413.813 kb on - strand, within BWI76_RS02015 at 413.874 kb on - strand, within BWI76_RS02015 at 413.935 kb on - strand, within BWI76_RS02015 at 414.012 kb on - strand, within BWI76_RS02015 at 414.098 kb on + strand, within BWI76_RS02015 at 414.143 kb on + strand at 414.151 kb on - strand at 414.191 kb on + strand at 414.199 kb on - strand at 414.201 kb on + strand at 414.209 kb on - strand at 414.209 kb on - strand at 414.335 kb on + strand at 414.347 kb on + strand at 414.439 kb on - strand at 414.439 kb on - strand at 414.507 kb on - strand at 414.525 kb on + strand at 414.528 kb on - strand at 414.530 kb on + strand at 414.533 kb on - strand at 414.565 kb on + strand at 414.602 kb on + strand, within BWI76_RS02020 at 414.727 kb on - strand, within BWI76_RS02020 at 414.798 kb on - strand, within BWI76_RS02020 at 414.808 kb on - strand, within BWI76_RS02020 at 414.808 kb on - strand, within BWI76_RS02020 at 415.019 kb on - strand, within BWI76_RS02020 at 415.074 kb on + strand, within BWI76_RS02020 at 415.099 kb on + strand, within BWI76_RS02020 at 415.099 kb on + strand, within BWI76_RS02020 at 415.107 kb on - strand, within BWI76_RS02020 at 415.166 kb on - strand, within BWI76_RS02020
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 1 remove 411,943 - BWI76_RS02005 0.13 -0.2 411,951 - BWI76_RS02005 0.14 -0.7 411,953 + BWI76_RS02005 0.15 -2.8 411,959 + BWI76_RS02005 0.16 +0.1 412,056 + BWI76_RS02005 0.30 +0.1 412,078 + BWI76_RS02005 0.33 +1.3 412,085 - BWI76_RS02005 0.34 +0.8 412,145 + BWI76_RS02005 0.43 +1.0 412,150 + BWI76_RS02005 0.44 +0.6 412,213 - BWI76_RS02005 0.54 -1.0 412,253 + BWI76_RS02005 0.59 +0.2 412,261 - BWI76_RS02005 0.61 -0.9 412,285 - BWI76_RS02005 0.64 -0.9 412,322 + BWI76_RS02005 0.70 -2.2 412,461 - -0.1 412,463 + +0.9 412,863 - +0.1 413,015 + -0.4 413,016 - +0.9 413,130 + BWI76_RS02015 0.16 +0.0 413,138 - BWI76_RS02015 0.17 +0.0 413,390 + BWI76_RS02015 0.35 +0.9 413,769 + +1.3 413,813 - BWI76_RS02015 0.67 +0.5 413,874 - BWI76_RS02015 0.71 +0.4 413,935 - BWI76_RS02015 0.76 -0.2 414,012 - BWI76_RS02015 0.81 +0.3 414,098 + BWI76_RS02015 0.88 -0.0 414,143 + +0.1 414,151 - +0.3 414,191 + +0.1 414,199 - -1.2 414,201 + +1.2 414,209 - -0.0 414,209 - +0.7 414,335 + -0.2 414,347 + +0.6 414,439 - +0.8 414,439 - +0.2 414,507 - +2.1 414,525 + +0.5 414,528 - +0.2 414,530 + -0.2 414,533 - -0.0 414,565 + +1.3 414,602 + BWI76_RS02020 0.12 -0.7 414,727 - BWI76_RS02020 0.19 -0.5 414,798 - BWI76_RS02020 0.24 +0.4 414,808 - BWI76_RS02020 0.24 -1.4 414,808 - BWI76_RS02020 0.24 +0.3 415,019 - BWI76_RS02020 0.37 +0.7 415,074 + BWI76_RS02020 0.40 -0.0 415,099 + BWI76_RS02020 0.42 -1.1 415,099 + BWI76_RS02020 0.42 -0.3 415,107 - BWI76_RS02020 0.42 -0.2 415,166 - BWI76_RS02020 0.46 -0.6
Or see this region's nucleotide sequence