Experiment: K. M5a1 KLEB23 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13325 and BWI76_RS13330 are separated by 2 nucleotides BWI76_RS13330 and BWI76_RS13335 overlap by 4 nucleotides BWI76_RS13335 and BWI76_RS13340 are separated by 113 nucleotides
BWI76_RS13325: BWI76_RS13325 - dicarboxylate transporter/tellurite-resistance protein TehA, at 2,779,061 to 2,780,059
_RS13325
BWI76_RS13330: BWI76_RS13330 - tellurite resistance methyltransferase TehB, at 2,780,062 to 2,780,658
_RS13330
BWI76_RS13335: BWI76_RS13335 - peptidase T, at 2,780,655 to 2,781,884
_RS13335
BWI76_RS13340: BWI76_RS13340 - peptide ABC transporter substrate-binding protein, at 2,781,998 to 2,783,590
_RS13340
Position (kb)
2780
2781
2782 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2780.143 kb on - strand, within BWI76_RS13330 at 2780.843 kb on + strand, within BWI76_RS13335 at 2780.999 kb on - strand, within BWI76_RS13335 at 2781.008 kb on + strand, within BWI76_RS13335 at 2781.340 kb on - strand, within BWI76_RS13335 at 2781.475 kb on - strand, within BWI76_RS13335 at 2781.532 kb on - strand, within BWI76_RS13335 at 2781.578 kb on - strand, within BWI76_RS13335 at 2781.629 kb on - strand, within BWI76_RS13335 at 2781.867 kb on + strand at 2781.884 kb on + strand at 2781.892 kb on - strand at 2782.016 kb on - strand at 2782.125 kb on - strand at 2782.126 kb on - strand at 2782.128 kb on - strand at 2782.137 kb on + strand at 2782.144 kb on + strand at 2782.144 kb on + strand at 2782.145 kb on - strand at 2782.145 kb on - strand at 2782.160 kb on + strand, within BWI76_RS13340 at 2782.194 kb on + strand, within BWI76_RS13340 at 2782.202 kb on - strand, within BWI76_RS13340 at 2782.202 kb on - strand, within BWI76_RS13340 at 2782.210 kb on - strand, within BWI76_RS13340 at 2782.372 kb on + strand, within BWI76_RS13340 at 2782.469 kb on - strand, within BWI76_RS13340 at 2782.486 kb on - strand, within BWI76_RS13340 at 2782.492 kb on - strand, within BWI76_RS13340 at 2782.524 kb on - strand, within BWI76_RS13340 at 2782.564 kb on + strand, within BWI76_RS13340 at 2782.572 kb on - strand, within BWI76_RS13340 at 2782.608 kb on + strand, within BWI76_RS13340 at 2782.611 kb on - strand, within BWI76_RS13340 at 2782.611 kb on - strand, within BWI76_RS13340 at 2782.681 kb on - strand, within BWI76_RS13340 at 2782.731 kb on + strand, within BWI76_RS13340 at 2782.819 kb on - strand, within BWI76_RS13340 at 2782.839 kb on - strand, within BWI76_RS13340
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10 remove 2,780,143 - BWI76_RS13330 0.14 +0.3 2,780,843 + BWI76_RS13335 0.15 -0.5 2,780,999 - BWI76_RS13335 0.28 +0.3 2,781,008 + BWI76_RS13335 0.29 -2.5 2,781,340 - BWI76_RS13335 0.56 -0.8 2,781,475 - BWI76_RS13335 0.67 -1.8 2,781,532 - BWI76_RS13335 0.71 -1.9 2,781,578 - BWI76_RS13335 0.75 -2.0 2,781,629 - BWI76_RS13335 0.79 -1.4 2,781,867 + -1.9 2,781,884 + +1.3 2,781,892 - +0.7 2,782,016 - -2.0 2,782,125 - -3.0 2,782,126 - -0.8 2,782,128 - +1.3 2,782,137 + -0.5 2,782,144 + -0.9 2,782,144 + -3.4 2,782,145 - -2.4 2,782,145 - +0.9 2,782,160 + BWI76_RS13340 0.10 -1.2 2,782,194 + BWI76_RS13340 0.12 +2.6 2,782,202 - BWI76_RS13340 0.13 -1.7 2,782,202 - BWI76_RS13340 0.13 +1.5 2,782,210 - BWI76_RS13340 0.13 +1.5 2,782,372 + BWI76_RS13340 0.23 -2.9 2,782,469 - BWI76_RS13340 0.30 -0.3 2,782,486 - BWI76_RS13340 0.31 +1.9 2,782,492 - BWI76_RS13340 0.31 -1.5 2,782,524 - BWI76_RS13340 0.33 +2.1 2,782,564 + BWI76_RS13340 0.36 +0.3 2,782,572 - BWI76_RS13340 0.36 -1.6 2,782,608 + BWI76_RS13340 0.38 -1.8 2,782,611 - BWI76_RS13340 0.38 -0.9 2,782,611 - BWI76_RS13340 0.38 -2.0 2,782,681 - BWI76_RS13340 0.43 +0.3 2,782,731 + BWI76_RS13340 0.46 +0.6 2,782,819 - BWI76_RS13340 0.52 +2.1 2,782,839 - BWI76_RS13340 0.53 -1.4
Or see this region's nucleotide sequence