Experiment: K. M5a1 KLEB23 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27300 and BWI76_RS27305 are separated by 2 nucleotides BWI76_RS27305 and BWI76_RS27310 are separated by 29 nucleotides
BWI76_RS27300: BWI76_RS27300 - glucuronic acid transferase, at 5,666,235 to 5,667,362
_RS27300
BWI76_RS27305: BWI76_RS27305 - glycosyl transferase, at 5,667,365 to 5,668,459
_RS27305
BWI76_RS27310: BWI76_RS27310 - glycosyltransferase, at 5,668,489 to 5,669,478
_RS27310
Position (kb) 5667
5668
5669 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 5667.523 kb on + strand, within BWI76_RS27305 at 5667.642 kb on + strand, within BWI76_RS27305 at 5667.840 kb on + strand, within BWI76_RS27305 at 5667.848 kb on - strand, within BWI76_RS27305 at 5667.963 kb on + strand, within BWI76_RS27305 at 5668.026 kb on - strand, within BWI76_RS27305 at 5668.074 kb on - strand, within BWI76_RS27305 at 5668.110 kb on + strand, within BWI76_RS27305 at 5668.111 kb on + strand, within BWI76_RS27305 at 5668.135 kb on + strand, within BWI76_RS27305 at 5668.143 kb on - strand, within BWI76_RS27305 at 5668.176 kb on - strand, within BWI76_RS27305 at 5668.176 kb on - strand, within BWI76_RS27305 at 5668.325 kb on + strand, within BWI76_RS27305 at 5668.345 kb on + strand, within BWI76_RS27305 at 5668.362 kb on + strand at 5668.416 kb on - strand at 5668.445 kb on - strand at 5668.589 kb on + strand, within BWI76_RS27310 at 5668.631 kb on + strand, within BWI76_RS27310 at 5668.746 kb on + strand, within BWI76_RS27310 at 5668.754 kb on - strand, within BWI76_RS27310 at 5668.776 kb on + strand, within BWI76_RS27310 at 5668.794 kb on - strand, within BWI76_RS27310 at 5668.948 kb on - strand, within BWI76_RS27310 at 5669.038 kb on - strand, within BWI76_RS27310 at 5669.103 kb on + strand, within BWI76_RS27310 at 5669.118 kb on + strand at 5669.118 kb on + strand, within BWI76_RS27310 at 5669.126 kb on - strand, within BWI76_RS27310 at 5669.137 kb on - strand, within BWI76_RS27310 at 5669.228 kb on + strand, within BWI76_RS27310 at 5669.325 kb on + strand, within BWI76_RS27310
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10 remove 5,667,523 + BWI76_RS27305 0.14 -1.3 5,667,642 + BWI76_RS27305 0.25 -0.4 5,667,840 + BWI76_RS27305 0.43 -1.7 5,667,848 - BWI76_RS27305 0.44 +0.4 5,667,963 + BWI76_RS27305 0.55 -4.2 5,668,026 - BWI76_RS27305 0.60 -1.4 5,668,074 - BWI76_RS27305 0.65 -2.6 5,668,110 + BWI76_RS27305 0.68 -1.4 5,668,111 + BWI76_RS27305 0.68 -0.7 5,668,135 + BWI76_RS27305 0.70 +0.4 5,668,143 - BWI76_RS27305 0.71 +2.0 5,668,176 - BWI76_RS27305 0.74 -2.1 5,668,176 - BWI76_RS27305 0.74 -0.9 5,668,325 + BWI76_RS27305 0.88 -3.0 5,668,345 + BWI76_RS27305 0.89 -0.6 5,668,362 + +0.1 5,668,416 - +0.1 5,668,445 - +7.0 5,668,589 + BWI76_RS27310 0.10 +7.0 5,668,631 + BWI76_RS27310 0.14 +6.8 5,668,746 + BWI76_RS27310 0.26 +6.9 5,668,754 - BWI76_RS27310 0.27 +7.3 5,668,776 + BWI76_RS27310 0.29 +7.1 5,668,794 - BWI76_RS27310 0.31 +6.7 5,668,948 - BWI76_RS27310 0.46 +6.7 5,669,038 - BWI76_RS27310 0.55 +6.8 5,669,103 + BWI76_RS27310 0.62 +6.6 5,669,118 + +8.4 5,669,118 + BWI76_RS27310 0.64 +7.4 5,669,126 - BWI76_RS27310 0.64 +6.3 5,669,137 - BWI76_RS27310 0.65 +7.0 5,669,228 + BWI76_RS27310 0.75 +7.2 5,669,325 + BWI76_RS27310 0.84 +8.0
Or see this region's nucleotide sequence