Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27305

Experiment: K. M5a1 KLEB23 MOI 10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27300 and BWI76_RS27305 are separated by 2 nucleotidesBWI76_RS27305 and BWI76_RS27310 are separated by 29 nucleotides BWI76_RS27300: BWI76_RS27300 - glucuronic acid transferase, at 5,666,235 to 5,667,362 _RS27300 BWI76_RS27305: BWI76_RS27305 - glycosyl transferase, at 5,667,365 to 5,668,459 _RS27305 BWI76_RS27310: BWI76_RS27310 - glycosyltransferase, at 5,668,489 to 5,669,478 _RS27310 Position (kb) 5667 5668 5669Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6 7 8at 5667.523 kb on + strand, within BWI76_RS27305at 5667.642 kb on + strand, within BWI76_RS27305at 5667.840 kb on + strand, within BWI76_RS27305at 5667.848 kb on - strand, within BWI76_RS27305at 5667.963 kb on + strand, within BWI76_RS27305at 5668.026 kb on - strand, within BWI76_RS27305at 5668.074 kb on - strand, within BWI76_RS27305at 5668.110 kb on + strand, within BWI76_RS27305at 5668.111 kb on + strand, within BWI76_RS27305at 5668.135 kb on + strand, within BWI76_RS27305at 5668.143 kb on - strand, within BWI76_RS27305at 5668.176 kb on - strand, within BWI76_RS27305at 5668.176 kb on - strand, within BWI76_RS27305at 5668.325 kb on + strand, within BWI76_RS27305at 5668.345 kb on + strand, within BWI76_RS27305at 5668.362 kb on + strandat 5668.416 kb on - strandat 5668.445 kb on - strandat 5668.589 kb on + strand, within BWI76_RS27310at 5668.631 kb on + strand, within BWI76_RS27310at 5668.746 kb on + strand, within BWI76_RS27310at 5668.754 kb on - strand, within BWI76_RS27310at 5668.776 kb on + strand, within BWI76_RS27310at 5668.794 kb on - strand, within BWI76_RS27310at 5668.948 kb on - strand, within BWI76_RS27310at 5669.038 kb on - strand, within BWI76_RS27310at 5669.103 kb on + strand, within BWI76_RS27310at 5669.118 kb on + strandat 5669.118 kb on + strand, within BWI76_RS27310at 5669.126 kb on - strand, within BWI76_RS27310at 5669.137 kb on - strand, within BWI76_RS27310at 5669.228 kb on + strand, within BWI76_RS27310at 5669.325 kb on + strand, within BWI76_RS27310

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10
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5,667,523 + BWI76_RS27305 0.14 -1.3
5,667,642 + BWI76_RS27305 0.25 -0.4
5,667,840 + BWI76_RS27305 0.43 -1.7
5,667,848 - BWI76_RS27305 0.44 +0.4
5,667,963 + BWI76_RS27305 0.55 -4.2
5,668,026 - BWI76_RS27305 0.60 -1.4
5,668,074 - BWI76_RS27305 0.65 -2.6
5,668,110 + BWI76_RS27305 0.68 -1.4
5,668,111 + BWI76_RS27305 0.68 -0.7
5,668,135 + BWI76_RS27305 0.70 +0.4
5,668,143 - BWI76_RS27305 0.71 +2.0
5,668,176 - BWI76_RS27305 0.74 -2.1
5,668,176 - BWI76_RS27305 0.74 -0.9
5,668,325 + BWI76_RS27305 0.88 -3.0
5,668,345 + BWI76_RS27305 0.89 -0.6
5,668,362 + +0.1
5,668,416 - +0.1
5,668,445 - +7.0
5,668,589 + BWI76_RS27310 0.10 +7.0
5,668,631 + BWI76_RS27310 0.14 +6.8
5,668,746 + BWI76_RS27310 0.26 +6.9
5,668,754 - BWI76_RS27310 0.27 +7.3
5,668,776 + BWI76_RS27310 0.29 +7.1
5,668,794 - BWI76_RS27310 0.31 +6.7
5,668,948 - BWI76_RS27310 0.46 +6.7
5,669,038 - BWI76_RS27310 0.55 +6.8
5,669,103 + BWI76_RS27310 0.62 +6.6
5,669,118 + +8.4
5,669,118 + BWI76_RS27310 0.64 +7.4
5,669,126 - BWI76_RS27310 0.64 +6.3
5,669,137 - BWI76_RS27310 0.65 +7.0
5,669,228 + BWI76_RS27310 0.75 +7.2
5,669,325 + BWI76_RS27310 0.84 +8.0

Or see this region's nucleotide sequence