Experiment: K. M5a1 KLEB23 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19000 and BWI76_RS19005 are separated by 225 nucleotides
BWI76_RS19000: BWI76_RS19000 - acyltransferase, at 3,943,705 to 3,944,826
_RS19000
BWI76_RS19005: BWI76_RS19005 - capsular polysaccharide biosynthesis protein, at 3,945,052 to 3,946,038
_RS19005
Position (kb)
3943
3944
3945 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 3942.786 kb on - strand at 3942.789 kb on - strand at 3942.791 kb on - strand at 3942.833 kb on - strand at 3942.857 kb on - strand at 3942.857 kb on - strand at 3942.908 kb on + strand at 3942.910 kb on - strand at 3942.916 kb on - strand at 3942.947 kb on - strand at 3942.966 kb on + strand at 3942.984 kb on - strand at 3942.989 kb on - strand at 3943.047 kb on - strand at 3943.066 kb on - strand at 3943.075 kb on - strand at 3943.088 kb on + strand at 3943.091 kb on - strand at 3943.115 kb on - strand at 3943.139 kb on - strand at 3943.190 kb on - strand at 3943.203 kb on + strand at 3943.211 kb on - strand at 3943.406 kb on - strand at 3943.429 kb on - strand at 3943.433 kb on - strand at 3943.443 kb on - strand at 3943.453 kb on - strand at 3943.453 kb on - strand at 3943.453 kb on - strand at 3943.453 kb on - strand at 3943.526 kb on + strand at 3943.526 kb on + strand at 3943.529 kb on - strand at 3943.534 kb on - strand at 3943.534 kb on - strand at 3943.536 kb on + strand at 3943.536 kb on + strand at 3943.544 kb on - strand at 3943.544 kb on - strand at 3943.565 kb on + strand at 3943.582 kb on + strand at 3943.582 kb on + strand at 3943.582 kb on + strand at 3943.582 kb on + strand at 3943.584 kb on + strand at 3943.584 kb on + strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.590 kb on - strand at 3943.689 kb on - strand at 3943.744 kb on + strand at 3943.744 kb on + strand at 3943.746 kb on + strand at 3943.780 kb on + strand at 3943.798 kb on - strand at 3944.032 kb on - strand, within BWI76_RS19000 at 3944.047 kb on - strand, within BWI76_RS19000 at 3944.068 kb on + strand, within BWI76_RS19000 at 3944.089 kb on - strand, within BWI76_RS19000 at 3944.168 kb on - strand, within BWI76_RS19000 at 3944.626 kb on - strand, within BWI76_RS19000 at 3944.692 kb on + strand, within BWI76_RS19000 at 3944.695 kb on - strand, within BWI76_RS19000 at 3944.699 kb on + strand, within BWI76_RS19000 at 3944.748 kb on - strand at 3944.764 kb on - strand at 3944.839 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.847 kb on - strand at 3944.891 kb on - strand at 3945.088 kb on - strand at 3945.299 kb on - strand, within BWI76_RS19005 at 3945.372 kb on - strand, within BWI76_RS19005
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10 remove 3,942,786 - +0.3 3,942,789 - -4.0 3,942,791 - -1.9 3,942,833 - -0.4 3,942,857 - -0.2 3,942,857 - -1.7 3,942,908 + +0.4 3,942,910 - -2.9 3,942,916 - +1.3 3,942,947 - +2.3 3,942,966 + -0.1 3,942,984 - +0.4 3,942,989 - -1.3 3,943,047 - -0.0 3,943,066 - -1.1 3,943,075 - -1.8 3,943,088 + -0.1 3,943,091 - -0.3 3,943,115 - +0.1 3,943,139 - -0.5 3,943,190 - +0.7 3,943,203 + -0.3 3,943,211 - -1.0 3,943,406 - -0.4 3,943,429 - -1.3 3,943,433 - -2.0 3,943,443 - -1.6 3,943,453 - +1.1 3,943,453 - -0.4 3,943,453 - -0.4 3,943,453 - -0.1 3,943,526 + +0.6 3,943,526 + +1.3 3,943,529 - -0.5 3,943,534 - +0.3 3,943,534 - -0.1 3,943,536 + +1.1 3,943,536 + +0.3 3,943,544 - -0.1 3,943,544 - -1.6 3,943,565 + +1.9 3,943,582 + -1.1 3,943,582 + +0.3 3,943,582 + +0.9 3,943,582 + -0.1 3,943,584 + +2.9 3,943,584 + +1.3 3,943,590 - -0.1 3,943,590 - -0.1 3,943,590 - -1.3 3,943,590 - -0.1 3,943,590 - -1.1 3,943,590 - +0.3 3,943,590 - +0.4 3,943,689 - +2.4 3,943,744 + +3.5 3,943,744 + +6.6 3,943,746 + +2.8 3,943,780 + +4.7 3,943,798 - +2.9 3,944,032 - BWI76_RS19000 0.29 +3.4 3,944,047 - BWI76_RS19000 0.30 +5.0 3,944,068 + BWI76_RS19000 0.32 +4.4 3,944,089 - BWI76_RS19000 0.34 +0.9 3,944,168 - BWI76_RS19000 0.41 +0.3 3,944,626 - BWI76_RS19000 0.82 +4.7 3,944,692 + BWI76_RS19000 0.88 +4.3 3,944,695 - BWI76_RS19000 0.88 +4.3 3,944,699 + BWI76_RS19000 0.89 +3.5 3,944,748 - +3.9 3,944,764 - +2.8 3,944,839 - -2.4 3,944,847 - +1.9 3,944,847 - -0.6 3,944,847 - +1.4 3,944,847 - -0.1 3,944,847 - +0.8 3,944,847 - -1.3 3,944,847 - +0.8 3,944,847 - -0.7 3,944,847 - -1.4 3,944,847 - -1.3 3,944,847 - +0.7 3,944,847 - -2.1 3,944,847 - +1.8 3,944,847 - +1.0 3,944,847 - +3.2 3,944,847 - +1.9 3,944,847 - +1.1 3,944,847 - -3.8 3,944,847 - +5.4 3,944,847 - +1.4 3,944,847 - -1.1 3,944,847 - -1.8 3,944,847 - +1.0 3,944,847 - -0.1 3,944,847 - -1.7 3,944,847 - -1.2 3,944,847 - +1.9 3,944,847 - -0.5 3,944,847 - +2.5 3,944,847 - -1.3 3,944,847 - -0.7 3,944,847 - -2.6 3,944,847 - +1.0 3,944,847 - -0.3 3,944,847 - -0.4 3,944,847 - -0.7 3,944,847 - -0.1 3,944,847 - +1.1 3,944,847 - -1.7 3,944,847 - +0.2 3,944,847 - -0.4 3,944,847 - -0.9 3,944,847 - +0.8 3,944,847 - +0.7 3,944,847 - -0.1 3,944,847 - +0.6 3,944,847 - -0.5 3,944,847 - -1.1 3,944,847 - +1.1 3,944,847 - +0.4 3,944,847 - -0.1 3,944,847 - +3.2 3,944,847 - -0.4 3,944,847 - +0.8 3,944,847 - -0.4 3,944,891 - +0.1 3,945,088 - +0.5 3,945,299 - BWI76_RS19005 0.25 +5.1 3,945,372 - BWI76_RS19005 0.32 +0.9
Or see this region's nucleotide sequence