Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03905

Experiment: K. M5a1 KLEB23 MOI 10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03900 and BWI76_RS03905 overlap by 4 nucleotidesBWI76_RS03905 and BWI76_RS03910 overlap by 14 nucleotidesBWI76_RS03910 and BWI76_RS03915 overlap by 4 nucleotides BWI76_RS03900: BWI76_RS03900 - Na+/proline symporter, at 806,232 to 807,719 _RS03900 BWI76_RS03905: BWI76_RS03905 - 2-oxo-3-deoxygalactonate kinase, at 807,716 to 808,588 _RS03905 BWI76_RS03910: BWI76_RS03910 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 808,575 to 809,177 _RS03910 BWI76_RS03915: BWI76_RS03915 - MurR/RpiR family transcriptional regulator, at 809,174 to 810,037 _RS03915 Position (kb) 807 808 809Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 806.717 kb on - strand, within BWI76_RS03900at 806.717 kb on - strand, within BWI76_RS03900at 806.717 kb on - strand, within BWI76_RS03900at 806.741 kb on + strand, within BWI76_RS03900at 806.749 kb on + strand, within BWI76_RS03900at 806.751 kb on + strandat 806.754 kb on - strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.756 kb on + strand, within BWI76_RS03900at 806.764 kb on - strand, within BWI76_RS03900at 806.764 kb on - strand, within BWI76_RS03900at 806.764 kb on - strandat 806.764 kb on - strand, within BWI76_RS03900at 806.764 kb on - strand, within BWI76_RS03900at 806.764 kb on - strand, within BWI76_RS03900at 806.767 kb on + strand, within BWI76_RS03900at 806.770 kb on + strand, within BWI76_RS03900at 806.772 kb on + strand, within BWI76_RS03900at 806.779 kb on - strand, within BWI76_RS03900at 806.785 kb on - strand, within BWI76_RS03900at 806.818 kb on + strand, within BWI76_RS03900at 806.824 kb on + strand, within BWI76_RS03900at 806.831 kb on + strand, within BWI76_RS03900at 806.831 kb on + strand, within BWI76_RS03900at 806.831 kb on + strand, within BWI76_RS03900at 806.833 kb on - strand, within BWI76_RS03900at 806.834 kb on - strand, within BWI76_RS03900at 806.835 kb on + strand, within BWI76_RS03900at 806.839 kb on + strand, within BWI76_RS03900at 806.843 kb on + strand, within BWI76_RS03900at 806.848 kb on + strand, within BWI76_RS03900at 806.848 kb on + strand, within BWI76_RS03900at 806.848 kb on + strand, within BWI76_RS03900at 806.848 kb on - strand, within BWI76_RS03900at 806.899 kb on + strand, within BWI76_RS03900at 806.899 kb on + strand, within BWI76_RS03900at 806.907 kb on - strand, within BWI76_RS03900at 807.006 kb on - strand, within BWI76_RS03900at 807.216 kb on - strand, within BWI76_RS03900at 807.234 kb on + strand, within BWI76_RS03900at 807.249 kb on + strand, within BWI76_RS03900at 807.257 kb on - strand, within BWI76_RS03900at 807.336 kb on + strand, within BWI76_RS03900at 807.396 kb on + strand, within BWI76_RS03900at 807.398 kb on + strand, within BWI76_RS03900at 807.403 kb on + strand, within BWI76_RS03900at 807.436 kb on + strand, within BWI76_RS03900at 807.499 kb on + strand, within BWI76_RS03900at 807.512 kb on + strand, within BWI76_RS03900at 807.512 kb on + strand, within BWI76_RS03900at 807.520 kb on - strand, within BWI76_RS03900at 807.520 kb on - strand, within BWI76_RS03900at 807.698 kb on + strandat 807.706 kb on - strandat 807.747 kb on + strandat 807.755 kb on - strandat 807.859 kb on + strand, within BWI76_RS03905at 807.951 kb on - strand, within BWI76_RS03905at 807.983 kb on - strand, within BWI76_RS03905at 808.000 kb on + strand, within BWI76_RS03905at 808.008 kb on - strand, within BWI76_RS03905at 808.114 kb on + strand, within BWI76_RS03905at 808.122 kb on - strandat 808.146 kb on - strand, within BWI76_RS03905at 808.314 kb on - strand, within BWI76_RS03905at 808.451 kb on - strand, within BWI76_RS03905at 808.503 kb on - strandat 808.582 kb on + strandat 808.774 kb on - strand, within BWI76_RS03910at 808.779 kb on - strand, within BWI76_RS03910at 809.235 kb on - strandat 809.333 kb on - strandat 809.380 kb on - strand, within BWI76_RS03915at 809.384 kb on - strand, within BWI76_RS03915at 809.484 kb on + strand, within BWI76_RS03915

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10
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806,717 - BWI76_RS03900 0.33 -0.0
806,717 - BWI76_RS03900 0.33 +1.2
806,717 - BWI76_RS03900 0.33 -1.9
806,741 + BWI76_RS03900 0.34 +0.4
806,749 + BWI76_RS03900 0.35 +0.7
806,751 + -0.1
806,754 - BWI76_RS03900 0.35 -0.7
806,756 + BWI76_RS03900 0.35 +1.0
806,756 + BWI76_RS03900 0.35 +0.7
806,756 + BWI76_RS03900 0.35 -0.5
806,756 + BWI76_RS03900 0.35 +0.2
806,756 + BWI76_RS03900 0.35 -0.6
806,756 + BWI76_RS03900 0.35 -0.7
806,756 + BWI76_RS03900 0.35 -3.2
806,764 - BWI76_RS03900 0.36 +2.0
806,764 - BWI76_RS03900 0.36 -2.6
806,764 - -1.9
806,764 - BWI76_RS03900 0.36 -2.8
806,764 - BWI76_RS03900 0.36 +0.1
806,764 - BWI76_RS03900 0.36 -1.8
806,767 + BWI76_RS03900 0.36 -2.1
806,770 + BWI76_RS03900 0.36 +0.1
806,772 + BWI76_RS03900 0.36 +1.1
806,779 - BWI76_RS03900 0.37 -1.0
806,785 - BWI76_RS03900 0.37 -2.5
806,818 + BWI76_RS03900 0.39 -3.2
806,824 + BWI76_RS03900 0.40 +0.1
806,831 + BWI76_RS03900 0.40 -0.4
806,831 + BWI76_RS03900 0.40 -0.6
806,831 + BWI76_RS03900 0.40 +4.2
806,833 - BWI76_RS03900 0.40 +2.6
806,834 - BWI76_RS03900 0.40 +0.2
806,835 + BWI76_RS03900 0.41 +0.6
806,839 + BWI76_RS03900 0.41 -0.1
806,843 + BWI76_RS03900 0.41 +0.7
806,848 + BWI76_RS03900 0.41 +0.1
806,848 + BWI76_RS03900 0.41 +0.4
806,848 + BWI76_RS03900 0.41 +0.2
806,848 - BWI76_RS03900 0.41 -0.1
806,899 + BWI76_RS03900 0.45 +0.5
806,899 + BWI76_RS03900 0.45 -0.7
806,907 - BWI76_RS03900 0.45 +0.3
807,006 - BWI76_RS03900 0.52 +0.6
807,216 - BWI76_RS03900 0.66 +2.4
807,234 + BWI76_RS03900 0.67 -0.3
807,249 + BWI76_RS03900 0.68 +2.8
807,257 - BWI76_RS03900 0.69 +0.2
807,336 + BWI76_RS03900 0.74 -2.0
807,396 + BWI76_RS03900 0.78 -0.2
807,398 + BWI76_RS03900 0.78 +0.4
807,403 + BWI76_RS03900 0.79 -3.8
807,436 + BWI76_RS03900 0.81 +0.5
807,499 + BWI76_RS03900 0.85 -0.5
807,512 + BWI76_RS03900 0.86 -1.8
807,512 + BWI76_RS03900 0.86 +0.1
807,520 - BWI76_RS03900 0.87 -2.8
807,520 - BWI76_RS03900 0.87 -1.7
807,698 + -0.4
807,706 - -0.5
807,747 + +0.0
807,755 - -3.4
807,859 + BWI76_RS03905 0.16 -0.0
807,951 - BWI76_RS03905 0.27 -0.3
807,983 - BWI76_RS03905 0.31 -0.2
808,000 + BWI76_RS03905 0.33 -0.0
808,008 - BWI76_RS03905 0.33 -1.6
808,114 + BWI76_RS03905 0.46 -3.9
808,122 - -0.4
808,146 - BWI76_RS03905 0.49 -1.2
808,314 - BWI76_RS03905 0.68 -0.7
808,451 - BWI76_RS03905 0.84 -0.4
808,503 - +0.1
808,582 + +0.6
808,774 - BWI76_RS03910 0.33 -0.2
808,779 - BWI76_RS03910 0.34 +0.1
809,235 - +1.2
809,333 - -0.7
809,380 - BWI76_RS03915 0.24 -0.6
809,384 - BWI76_RS03915 0.24 +1.2
809,484 + BWI76_RS03915 0.36 -0.3

Or see this region's nucleotide sequence