Experiment: K. M5a1 KLEB23 MOI 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02950 and BWI76_RS02955 are separated by 26 nucleotides BWI76_RS02955 and BWI76_RS02960 are separated by 198 nucleotides
BWI76_RS02950: BWI76_RS02950 - 6-phospho-beta-glucosidase, at 602,763 to 604,070
_RS02950
BWI76_RS02955: BWI76_RS02955 - PTS system, cellobiose-specific IIC component, at 604,097 to 605,453
_RS02955
BWI76_RS02960: BWI76_RS02960 - glucohydrolase, at 605,652 to 607,307
_RS02960
Position (kb) 604
605
606 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 603.340 kb on + strand, within BWI76_RS02950 at 603.402 kb on + strand, within BWI76_RS02950 at 603.673 kb on + strand, within BWI76_RS02950 at 603.730 kb on - strand, within BWI76_RS02950 at 604.028 kb on + strand at 604.029 kb on + strand at 604.031 kb on - strand at 604.100 kb on - strand at 604.171 kb on + strand at 604.395 kb on + strand, within BWI76_RS02955 at 604.395 kb on + strand, within BWI76_RS02955 at 604.697 kb on - strand, within BWI76_RS02955 at 604.762 kb on + strand, within BWI76_RS02955 at 604.842 kb on + strand, within BWI76_RS02955 at 604.842 kb on + strand, within BWI76_RS02955 at 604.850 kb on - strand, within BWI76_RS02955 at 604.886 kb on - strand, within BWI76_RS02955 at 604.922 kb on - strand, within BWI76_RS02955 at 604.975 kb on + strand, within BWI76_RS02955 at 605.048 kb on - strand, within BWI76_RS02955 at 605.309 kb on + strand, within BWI76_RS02955 at 605.422 kb on + strand at 605.455 kb on + strand at 605.597 kb on + strand at 605.604 kb on + strand at 605.604 kb on + strand at 605.636 kb on - strand at 605.690 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB23 MOI 10 remove 603,340 + BWI76_RS02950 0.44 +0.6 603,402 + BWI76_RS02950 0.49 +0.2 603,673 + BWI76_RS02950 0.70 +1.4 603,730 - BWI76_RS02950 0.74 +1.3 604,028 + +0.7 604,029 + -0.0 604,031 - +1.2 604,100 - -1.3 604,171 + +0.5 604,395 + BWI76_RS02955 0.22 +0.1 604,395 + BWI76_RS02955 0.22 +0.3 604,697 - BWI76_RS02955 0.44 +1.3 604,762 + BWI76_RS02955 0.49 +1.9 604,842 + BWI76_RS02955 0.55 +1.5 604,842 + BWI76_RS02955 0.55 +0.6 604,850 - BWI76_RS02955 0.55 +0.5 604,886 - BWI76_RS02955 0.58 +0.2 604,922 - BWI76_RS02955 0.61 +1.2 604,975 + BWI76_RS02955 0.65 +0.7 605,048 - BWI76_RS02955 0.70 -3.1 605,309 + BWI76_RS02955 0.89 +1.5 605,422 + -0.8 605,455 + +0.5 605,597 + +0.9 605,604 + -0.5 605,604 + +0.6 605,636 - +0.3 605,690 + -0.4
Or see this region's nucleotide sequence