Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27260

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27255 and BWI76_RS27260 are separated by 214 nucleotidesBWI76_RS27260 and BWI76_RS27265 are separated by 9 nucleotides BWI76_RS27255: BWI76_RS27255 - 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data), at 5,656,513 to 5,657,706 _RS27255 BWI76_RS27260: BWI76_RS27260 - ADP-L-glycero-D-mannoheptose-6-epimerase, at 5,657,921 to 5,658,853 _RS27260 BWI76_RS27265: BWI76_RS27265 - ADP-heptose--LPS heptosyltransferase II, at 5,658,863 to 5,659,921 _RS27265 Position (kb) 5657 5658 5659Strain fitness (log2 ratio) -3 -2 -1 0 1at 5657.029 kb on - strand, within BWI76_RS27255at 5657.029 kb on - strand, within BWI76_RS27255at 5657.134 kb on - strand, within BWI76_RS27255at 5657.137 kb on + strand, within BWI76_RS27255at 5657.153 kb on + strand, within BWI76_RS27255at 5657.275 kb on - strand, within BWI76_RS27255at 5657.277 kb on + strand, within BWI76_RS27255at 5657.305 kb on + strand, within BWI76_RS27255at 5657.313 kb on - strand, within BWI76_RS27255at 5657.313 kb on - strand, within BWI76_RS27255at 5657.394 kb on - strand, within BWI76_RS27255at 5657.447 kb on - strandat 5657.529 kb on + strand, within BWI76_RS27255at 5657.629 kb on - strandat 5657.663 kb on + strandat 5657.663 kb on + strandat 5657.671 kb on - strandat 5657.671 kb on - strandat 5657.673 kb on - strandat 5657.751 kb on + strandat 5657.758 kb on + strandat 5657.759 kb on - strandat 5657.759 kb on - strandat 5657.759 kb on - strandat 5657.759 kb on - strandat 5657.814 kb on + strandat 5657.815 kb on + strandat 5657.815 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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5,657,029 - BWI76_RS27255 0.43 -1.2
5,657,029 - BWI76_RS27255 0.43 -0.3
5,657,134 - BWI76_RS27255 0.52 -0.4
5,657,137 + BWI76_RS27255 0.52 -2.9
5,657,153 + BWI76_RS27255 0.54 +0.4
5,657,275 - BWI76_RS27255 0.64 -1.1
5,657,277 + BWI76_RS27255 0.64 +1.4
5,657,305 + BWI76_RS27255 0.66 -0.4
5,657,313 - BWI76_RS27255 0.67 +0.3
5,657,313 - BWI76_RS27255 0.67 -0.3
5,657,394 - BWI76_RS27255 0.74 -1.3
5,657,447 - +1.7
5,657,529 + BWI76_RS27255 0.85 -0.0
5,657,629 - -2.1
5,657,663 + -1.2
5,657,663 + +0.7
5,657,671 - +0.0
5,657,671 - -0.2
5,657,673 - +0.5
5,657,751 + -1.9
5,657,758 + +0.2
5,657,759 - +0.1
5,657,759 - -0.1
5,657,759 - +1.1
5,657,759 - +1.1
5,657,814 + +0.2
5,657,815 + +1.0
5,657,815 + +1.0

Or see this region's nucleotide sequence