Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26960 and BWI76_RS26965 are separated by 50 nucleotides BWI76_RS26965 and BWI76_RS26970 are separated by 441 nucleotides
BWI76_RS26960: BWI76_RS26960 - bifunctional glyoxylate/hydroxypyruvate reductase B, at 5,592,785 to 5,593,756
_RS26960
BWI76_RS26965: BWI76_RS26965 - hypothetical protein, at 5,593,807 to 5,594,517
_RS26965
BWI76_RS26970: BWI76_RS26970 - aromatic acid/H+ symport family MFS transporter, at 5,594,959 to 5,596,317
_RS26970
Position (kb)
5593
5594
5595 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5593.068 kb on + strand, within BWI76_RS26960 at 5593.162 kb on + strand, within BWI76_RS26960 at 5593.342 kb on + strand, within BWI76_RS26960 at 5593.406 kb on - strand, within BWI76_RS26960 at 5593.406 kb on - strand, within BWI76_RS26960 at 5593.655 kb on + strand, within BWI76_RS26960 at 5593.663 kb on - strand at 5593.664 kb on + strand at 5593.724 kb on + strand at 5593.777 kb on + strand at 5593.785 kb on - strand at 5593.785 kb on - strand at 5593.806 kb on - strand at 5593.840 kb on - strand at 5594.199 kb on + strand, within BWI76_RS26965 at 5594.199 kb on + strand, within BWI76_RS26965 at 5594.245 kb on - strand, within BWI76_RS26965 at 5594.274 kb on + strand, within BWI76_RS26965 at 5594.380 kb on - strand, within BWI76_RS26965 at 5594.572 kb on - strand at 5594.574 kb on + strand at 5594.582 kb on - strand at 5594.582 kb on - strand at 5594.582 kb on - strand at 5594.602 kb on - strand at 5594.663 kb on + strand at 5594.675 kb on + strand at 5595.095 kb on + strand, within BWI76_RS26970 at 5595.103 kb on - strand, within BWI76_RS26970 at 5595.103 kb on - strand, within BWI76_RS26970 at 5595.295 kb on - strand, within BWI76_RS26970 at 5595.295 kb on - strand, within BWI76_RS26970 at 5595.323 kb on + strand, within BWI76_RS26970 at 5595.414 kb on - strand, within BWI76_RS26970 at 5595.434 kb on + strand, within BWI76_RS26970
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 5,593,068 + BWI76_RS26960 0.29 -0.3 5,593,162 + BWI76_RS26960 0.39 +0.2 5,593,342 + BWI76_RS26960 0.57 +1.6 5,593,406 - BWI76_RS26960 0.64 +1.1 5,593,406 - BWI76_RS26960 0.64 +1.0 5,593,655 + BWI76_RS26960 0.90 -0.1 5,593,663 - +0.4 5,593,664 + +0.2 5,593,724 + +0.6 5,593,777 + -0.9 5,593,785 - -3.0 5,593,785 - +0.8 5,593,806 - +0.2 5,593,840 - +0.3 5,594,199 + BWI76_RS26965 0.55 -0.7 5,594,199 + BWI76_RS26965 0.55 +0.3 5,594,245 - BWI76_RS26965 0.62 -0.9 5,594,274 + BWI76_RS26965 0.66 -2.4 5,594,380 - BWI76_RS26965 0.81 +0.9 5,594,572 - -0.2 5,594,574 + -1.4 5,594,582 - +0.5 5,594,582 - -0.1 5,594,582 - -1.1 5,594,602 - +0.7 5,594,663 + -2.0 5,594,675 + +0.6 5,595,095 + BWI76_RS26970 0.10 -1.1 5,595,103 - BWI76_RS26970 0.11 -0.6 5,595,103 - BWI76_RS26970 0.11 +1.1 5,595,295 - BWI76_RS26970 0.25 +0.0 5,595,295 - BWI76_RS26970 0.25 -2.2 5,595,323 + BWI76_RS26970 0.27 +0.5 5,595,414 - BWI76_RS26970 0.33 -0.8 5,595,434 + BWI76_RS26970 0.35 -2.2
Or see this region's nucleotide sequence