Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24455

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24445 and BWI76_RS24450 are separated by 54 nucleotidesBWI76_RS24450 and BWI76_RS24455 are separated by 273 nucleotidesBWI76_RS24455 and BWI76_RS24460 are separated by 58 nucleotides BWI76_RS24445: BWI76_RS24445 - hypothetical protein, at 5,097,065 to 5,097,346 _RS24445 BWI76_RS24450: BWI76_RS24450 - glycogen synthase, at 5,097,401 to 5,097,610 _RS24450 BWI76_RS24455: BWI76_RS24455 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase, at 5,097,884 to 5,099,317 _RS24455 BWI76_RS24460: BWI76_RS24460 - bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase, at 5,099,376 to 5,102,210 _RS24460 Position (kb) 5097 5098 5099 5100Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 5096.969 kb on + strandat 5097.035 kb on + strandat 5097.035 kb on + strandat 5097.035 kb on + strandat 5097.040 kb on + strandat 5097.043 kb on - strandat 5097.050 kb on + strandat 5097.058 kb on - strandat 5097.418 kb on + strandat 5097.675 kb on + strandat 5099.498 kb on - strandat 5099.550 kb on - strandat 5099.550 kb on - strandat 5099.627 kb on - strandat 5099.872 kb on + strand, within BWI76_RS24460at 5100.118 kb on + strand, within BWI76_RS24460at 5100.281 kb on - strand, within BWI76_RS24460

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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5,096,969 + +5.4
5,097,035 + +0.8
5,097,035 + +1.9
5,097,035 + +0.2
5,097,040 + -0.2
5,097,043 - +1.3
5,097,050 + -1.3
5,097,058 - +2.4
5,097,418 + -0.5
5,097,675 + -0.3
5,099,498 - -1.2
5,099,550 - -1.3
5,099,550 - +0.7
5,099,627 - -0.3
5,099,872 + BWI76_RS24460 0.17 -3.0
5,100,118 + BWI76_RS24460 0.26 -3.5
5,100,281 - BWI76_RS24460 0.32 -0.0

Or see this region's nucleotide sequence