Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23115

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23105 and BWI76_RS23110 overlap by 4 nucleotidesBWI76_RS23110 and BWI76_RS23115 are separated by 18 nucleotidesBWI76_RS23115 and BWI76_RS23120 are separated by 10 nucleotidesBWI76_RS23120 and BWI76_RS23125 are separated by 14 nucleotides BWI76_RS23105: BWI76_RS23105 - propanediol utilization protein PduA, at 4,817,599 to 4,817,883 _RS23105 BWI76_RS23110: BWI76_RS23110 - microcompartment protein PduB, at 4,817,880 to 4,818,692 _RS23110 BWI76_RS23115: BWI76_RS23115 - propanediol dehydratase large subunit, at 4,818,711 to 4,820,375 _RS23115 BWI76_RS23120: BWI76_RS23120 - propanediol dehydratase medium subunit, at 4,820,386 to 4,821,045 _RS23120 BWI76_RS23125: BWI76_RS23125 - propanediol dehydratase small subunit, at 4,821,060 to 4,821,581 _RS23125 Position (kb) 4818 4819 4820 4821Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.714 kb on + strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.722 kb on - strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.724 kb on + strand, within BWI76_RS23105at 4817.732 kb on - strand, within BWI76_RS23105at 4817.732 kb on - strand, within BWI76_RS23105at 4817.737 kb on - strand, within BWI76_RS23105at 4817.808 kb on + strand, within BWI76_RS23105at 4817.816 kb on - strand, within BWI76_RS23105at 4817.818 kb on + strand, within BWI76_RS23105at 4817.870 kb on + strandat 4817.878 kb on - strandat 4817.890 kb on - strandat 4817.895 kb on - strandat 4817.906 kb on + strandat 4817.906 kb on + strandat 4817.954 kb on - strandat 4818.018 kb on - strand, within BWI76_RS23110at 4818.018 kb on - strand, within BWI76_RS23110at 4818.054 kb on - strand, within BWI76_RS23110at 4818.054 kb on - strand, within BWI76_RS23110at 4818.076 kb on - strand, within BWI76_RS23110at 4818.145 kb on + strand, within BWI76_RS23110at 4818.153 kb on - strand, within BWI76_RS23110at 4818.153 kb on - strand, within BWI76_RS23110at 4818.236 kb on - strand, within BWI76_RS23110at 4818.322 kb on - strand, within BWI76_RS23110at 4818.374 kb on + strand, within BWI76_RS23110at 4818.374 kb on + strand, within BWI76_RS23110at 4818.530 kb on - strand, within BWI76_RS23110at 4818.595 kb on - strand, within BWI76_RS23110at 4818.689 kb on - strandat 4818.761 kb on - strandat 4818.932 kb on - strand, within BWI76_RS23115at 4818.932 kb on - strand, within BWI76_RS23115at 4818.932 kb on - strand, within BWI76_RS23115at 4818.971 kb on + strand, within BWI76_RS23115at 4819.258 kb on - strand, within BWI76_RS23115at 4819.258 kb on - strand, within BWI76_RS23115at 4819.340 kb on - strand, within BWI76_RS23115at 4819.647 kb on - strand, within BWI76_RS23115at 4819.728 kb on - strand, within BWI76_RS23115at 4820.086 kb on - strand, within BWI76_RS23115at 4820.093 kb on + strand, within BWI76_RS23115at 4820.174 kb on - strand, within BWI76_RS23115at 4820.192 kb on + strand, within BWI76_RS23115at 4820.222 kb on - strandat 4820.350 kb on + strandat 4820.352 kb on + strandat 4820.458 kb on - strand, within BWI76_RS23120at 4820.851 kb on + strand, within BWI76_RS23120at 4820.920 kb on + strand, within BWI76_RS23120at 4821.096 kb on + strandat 4821.290 kb on + strand, within BWI76_RS23125

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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4,817,714 + BWI76_RS23105 0.40 +2.2
4,817,714 + BWI76_RS23105 0.40 -1.8
4,817,714 + BWI76_RS23105 0.40 +1.4
4,817,714 + BWI76_RS23105 0.40 -0.0
4,817,714 + BWI76_RS23105 0.40 -1.5
4,817,714 + BWI76_RS23105 0.40 +0.2
4,817,714 + BWI76_RS23105 0.40 -1.4
4,817,714 + BWI76_RS23105 0.40 -4.1
4,817,714 + BWI76_RS23105 0.40 -1.5
4,817,714 + BWI76_RS23105 0.40 -1.1
4,817,714 + BWI76_RS23105 0.40 +1.4
4,817,714 + BWI76_RS23105 0.40 +0.3
4,817,714 + BWI76_RS23105 0.40 -1.1
4,817,714 + BWI76_RS23105 0.40 -1.0
4,817,714 + BWI76_RS23105 0.40 +0.3
4,817,714 + BWI76_RS23105 0.40 +0.6
4,817,714 + BWI76_RS23105 0.40 -0.3
4,817,714 + BWI76_RS23105 0.40 -1.3
4,817,714 + BWI76_RS23105 0.40 -1.4
4,817,714 + BWI76_RS23105 0.40 -3.2
4,817,714 + BWI76_RS23105 0.40 -3.7
4,817,714 + BWI76_RS23105 0.40 -3.9
4,817,714 + BWI76_RS23105 0.40 +0.3
4,817,714 + BWI76_RS23105 0.40 +1.8
4,817,714 + BWI76_RS23105 0.40 -1.1
4,817,714 + BWI76_RS23105 0.40 -1.1
4,817,714 + BWI76_RS23105 0.40 -1.0
4,817,714 + BWI76_RS23105 0.40 -0.2
4,817,714 + BWI76_RS23105 0.40 -0.7
4,817,714 + BWI76_RS23105 0.40 +0.0
4,817,714 + BWI76_RS23105 0.40 -0.5
4,817,714 + BWI76_RS23105 0.40 -1.0
4,817,714 + BWI76_RS23105 0.40 -0.3
4,817,714 + BWI76_RS23105 0.40 +0.9
4,817,714 + BWI76_RS23105 0.40 -1.6
4,817,714 + BWI76_RS23105 0.40 +0.4
4,817,714 + BWI76_RS23105 0.40 +0.4
4,817,722 - BWI76_RS23105 0.43 +1.6
4,817,722 - BWI76_RS23105 0.43 -0.9
4,817,722 - BWI76_RS23105 0.43 -2.1
4,817,722 - BWI76_RS23105 0.43 -0.7
4,817,722 - BWI76_RS23105 0.43 -1.4
4,817,722 - BWI76_RS23105 0.43 -0.3
4,817,722 - BWI76_RS23105 0.43 -0.7
4,817,722 - BWI76_RS23105 0.43 -1.3
4,817,722 - BWI76_RS23105 0.43 -2.1
4,817,722 - BWI76_RS23105 0.43 -1.0
4,817,722 - BWI76_RS23105 0.43 +2.3
4,817,722 - BWI76_RS23105 0.43 +1.0
4,817,722 - BWI76_RS23105 0.43 -0.3
4,817,722 - BWI76_RS23105 0.43 -0.1
4,817,722 - BWI76_RS23105 0.43 -1.0
4,817,722 - BWI76_RS23105 0.43 +1.5
4,817,722 - BWI76_RS23105 0.43 -1.8
4,817,722 - BWI76_RS23105 0.43 +1.3
4,817,722 - BWI76_RS23105 0.43 -0.1
4,817,722 - BWI76_RS23105 0.43 +0.0
4,817,724 + BWI76_RS23105 0.44 +1.3
4,817,724 + BWI76_RS23105 0.44 +0.5
4,817,724 + BWI76_RS23105 0.44 -3.3
4,817,724 + BWI76_RS23105 0.44 +0.9
4,817,724 + BWI76_RS23105 0.44 -0.7
4,817,724 + BWI76_RS23105 0.44 +1.2
4,817,732 - BWI76_RS23105 0.47 +0.4
4,817,732 - BWI76_RS23105 0.47 -4.2
4,817,737 - BWI76_RS23105 0.48 +0.2
4,817,808 + BWI76_RS23105 0.73 -1.1
4,817,816 - BWI76_RS23105 0.76 -1.0
4,817,818 + BWI76_RS23105 0.77 -0.3
4,817,870 + +0.0
4,817,878 - +0.7
4,817,890 - -1.5
4,817,895 - -0.0
4,817,906 + +0.3
4,817,906 + +0.6
4,817,954 - -1.6
4,818,018 - BWI76_RS23110 0.17 -1.1
4,818,018 - BWI76_RS23110 0.17 +0.6
4,818,054 - BWI76_RS23110 0.21 -1.8
4,818,054 - BWI76_RS23110 0.21 -0.8
4,818,076 - BWI76_RS23110 0.24 +0.0
4,818,145 + BWI76_RS23110 0.33 -0.1
4,818,153 - BWI76_RS23110 0.34 -0.2
4,818,153 - BWI76_RS23110 0.34 -0.1
4,818,236 - BWI76_RS23110 0.44 +0.6
4,818,322 - BWI76_RS23110 0.54 +0.1
4,818,374 + BWI76_RS23110 0.61 -0.4
4,818,374 + BWI76_RS23110 0.61 +0.3
4,818,530 - BWI76_RS23110 0.80 -2.4
4,818,595 - BWI76_RS23110 0.88 -1.8
4,818,689 - +0.8
4,818,761 - -0.9
4,818,932 - BWI76_RS23115 0.13 -0.0
4,818,932 - BWI76_RS23115 0.13 -0.8
4,818,932 - BWI76_RS23115 0.13 +1.2
4,818,971 + BWI76_RS23115 0.16 -0.4
4,819,258 - BWI76_RS23115 0.33 +0.8
4,819,258 - BWI76_RS23115 0.33 +0.2
4,819,340 - BWI76_RS23115 0.38 -2.8
4,819,647 - BWI76_RS23115 0.56 -0.0
4,819,728 - BWI76_RS23115 0.61 -3.5
4,820,086 - BWI76_RS23115 0.83 -0.9
4,820,093 + BWI76_RS23115 0.83 -0.3
4,820,174 - BWI76_RS23115 0.88 -1.4
4,820,192 + BWI76_RS23115 0.89 -2.8
4,820,222 - +0.9
4,820,350 + +0.1
4,820,352 + -1.3
4,820,458 - BWI76_RS23120 0.11 -0.6
4,820,851 + BWI76_RS23120 0.70 +2.6
4,820,920 + BWI76_RS23120 0.81 -0.4
4,821,096 + +1.9
4,821,290 + BWI76_RS23125 0.44 -1.4

Or see this region's nucleotide sequence