Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23105 and BWI76_RS23110 overlap by 4 nucleotides BWI76_RS23110 and BWI76_RS23115 are separated by 18 nucleotides BWI76_RS23115 and BWI76_RS23120 are separated by 10 nucleotides BWI76_RS23120 and BWI76_RS23125 are separated by 14 nucleotides
BWI76_RS23105: BWI76_RS23105 - propanediol utilization protein PduA, at 4,817,599 to 4,817,883
_RS23105
BWI76_RS23110: BWI76_RS23110 - microcompartment protein PduB, at 4,817,880 to 4,818,692
_RS23110
BWI76_RS23115: BWI76_RS23115 - propanediol dehydratase large subunit, at 4,818,711 to 4,820,375
_RS23115
BWI76_RS23120: BWI76_RS23120 - propanediol dehydratase medium subunit, at 4,820,386 to 4,821,045
_RS23120
BWI76_RS23125: BWI76_RS23125 - propanediol dehydratase small subunit, at 4,821,060 to 4,821,581
_RS23125
Position (kb)
4818
4819
4820
4821 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.714 kb on + strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.722 kb on - strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.724 kb on + strand, within BWI76_RS23105 at 4817.732 kb on - strand, within BWI76_RS23105 at 4817.732 kb on - strand, within BWI76_RS23105 at 4817.737 kb on - strand, within BWI76_RS23105 at 4817.808 kb on + strand, within BWI76_RS23105 at 4817.816 kb on - strand, within BWI76_RS23105 at 4817.818 kb on + strand, within BWI76_RS23105 at 4817.870 kb on + strand at 4817.878 kb on - strand at 4817.890 kb on - strand at 4817.895 kb on - strand at 4817.906 kb on + strand at 4817.906 kb on + strand at 4817.954 kb on - strand at 4818.018 kb on - strand, within BWI76_RS23110 at 4818.018 kb on - strand, within BWI76_RS23110 at 4818.054 kb on - strand, within BWI76_RS23110 at 4818.054 kb on - strand, within BWI76_RS23110 at 4818.076 kb on - strand, within BWI76_RS23110 at 4818.145 kb on + strand, within BWI76_RS23110 at 4818.153 kb on - strand, within BWI76_RS23110 at 4818.153 kb on - strand, within BWI76_RS23110 at 4818.236 kb on - strand, within BWI76_RS23110 at 4818.322 kb on - strand, within BWI76_RS23110 at 4818.374 kb on + strand, within BWI76_RS23110 at 4818.374 kb on + strand, within BWI76_RS23110 at 4818.530 kb on - strand, within BWI76_RS23110 at 4818.595 kb on - strand, within BWI76_RS23110 at 4818.689 kb on - strand at 4818.761 kb on - strand at 4818.932 kb on - strand, within BWI76_RS23115 at 4818.932 kb on - strand, within BWI76_RS23115 at 4818.932 kb on - strand, within BWI76_RS23115 at 4818.971 kb on + strand, within BWI76_RS23115 at 4819.258 kb on - strand, within BWI76_RS23115 at 4819.258 kb on - strand, within BWI76_RS23115 at 4819.340 kb on - strand, within BWI76_RS23115 at 4819.647 kb on - strand, within BWI76_RS23115 at 4819.728 kb on - strand, within BWI76_RS23115 at 4820.086 kb on - strand, within BWI76_RS23115 at 4820.093 kb on + strand, within BWI76_RS23115 at 4820.174 kb on - strand, within BWI76_RS23115 at 4820.192 kb on + strand, within BWI76_RS23115 at 4820.222 kb on - strand at 4820.350 kb on + strand at 4820.352 kb on + strand at 4820.458 kb on - strand, within BWI76_RS23120 at 4820.851 kb on + strand, within BWI76_RS23120 at 4820.920 kb on + strand, within BWI76_RS23120 at 4821.096 kb on + strand at 4821.290 kb on + strand, within BWI76_RS23125
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 4,817,714 + BWI76_RS23105 0.40 +2.2 4,817,714 + BWI76_RS23105 0.40 -1.8 4,817,714 + BWI76_RS23105 0.40 +1.4 4,817,714 + BWI76_RS23105 0.40 -0.0 4,817,714 + BWI76_RS23105 0.40 -1.5 4,817,714 + BWI76_RS23105 0.40 +0.2 4,817,714 + BWI76_RS23105 0.40 -1.4 4,817,714 + BWI76_RS23105 0.40 -4.1 4,817,714 + BWI76_RS23105 0.40 -1.5 4,817,714 + BWI76_RS23105 0.40 -1.1 4,817,714 + BWI76_RS23105 0.40 +1.4 4,817,714 + BWI76_RS23105 0.40 +0.3 4,817,714 + BWI76_RS23105 0.40 -1.1 4,817,714 + BWI76_RS23105 0.40 -1.0 4,817,714 + BWI76_RS23105 0.40 +0.3 4,817,714 + BWI76_RS23105 0.40 +0.6 4,817,714 + BWI76_RS23105 0.40 -0.3 4,817,714 + BWI76_RS23105 0.40 -1.3 4,817,714 + BWI76_RS23105 0.40 -1.4 4,817,714 + BWI76_RS23105 0.40 -3.2 4,817,714 + BWI76_RS23105 0.40 -3.7 4,817,714 + BWI76_RS23105 0.40 -3.9 4,817,714 + BWI76_RS23105 0.40 +0.3 4,817,714 + BWI76_RS23105 0.40 +1.8 4,817,714 + BWI76_RS23105 0.40 -1.1 4,817,714 + BWI76_RS23105 0.40 -1.1 4,817,714 + BWI76_RS23105 0.40 -1.0 4,817,714 + BWI76_RS23105 0.40 -0.2 4,817,714 + BWI76_RS23105 0.40 -0.7 4,817,714 + BWI76_RS23105 0.40 +0.0 4,817,714 + BWI76_RS23105 0.40 -0.5 4,817,714 + BWI76_RS23105 0.40 -1.0 4,817,714 + BWI76_RS23105 0.40 -0.3 4,817,714 + BWI76_RS23105 0.40 +0.9 4,817,714 + BWI76_RS23105 0.40 -1.6 4,817,714 + BWI76_RS23105 0.40 +0.4 4,817,714 + BWI76_RS23105 0.40 +0.4 4,817,722 - BWI76_RS23105 0.43 +1.6 4,817,722 - BWI76_RS23105 0.43 -0.9 4,817,722 - BWI76_RS23105 0.43 -2.1 4,817,722 - BWI76_RS23105 0.43 -0.7 4,817,722 - BWI76_RS23105 0.43 -1.4 4,817,722 - BWI76_RS23105 0.43 -0.3 4,817,722 - BWI76_RS23105 0.43 -0.7 4,817,722 - BWI76_RS23105 0.43 -1.3 4,817,722 - BWI76_RS23105 0.43 -2.1 4,817,722 - BWI76_RS23105 0.43 -1.0 4,817,722 - BWI76_RS23105 0.43 +2.3 4,817,722 - BWI76_RS23105 0.43 +1.0 4,817,722 - BWI76_RS23105 0.43 -0.3 4,817,722 - BWI76_RS23105 0.43 -0.1 4,817,722 - BWI76_RS23105 0.43 -1.0 4,817,722 - BWI76_RS23105 0.43 +1.5 4,817,722 - BWI76_RS23105 0.43 -1.8 4,817,722 - BWI76_RS23105 0.43 +1.3 4,817,722 - BWI76_RS23105 0.43 -0.1 4,817,722 - BWI76_RS23105 0.43 +0.0 4,817,724 + BWI76_RS23105 0.44 +1.3 4,817,724 + BWI76_RS23105 0.44 +0.5 4,817,724 + BWI76_RS23105 0.44 -3.3 4,817,724 + BWI76_RS23105 0.44 +0.9 4,817,724 + BWI76_RS23105 0.44 -0.7 4,817,724 + BWI76_RS23105 0.44 +1.2 4,817,732 - BWI76_RS23105 0.47 +0.4 4,817,732 - BWI76_RS23105 0.47 -4.2 4,817,737 - BWI76_RS23105 0.48 +0.2 4,817,808 + BWI76_RS23105 0.73 -1.1 4,817,816 - BWI76_RS23105 0.76 -1.0 4,817,818 + BWI76_RS23105 0.77 -0.3 4,817,870 + +0.0 4,817,878 - +0.7 4,817,890 - -1.5 4,817,895 - -0.0 4,817,906 + +0.3 4,817,906 + +0.6 4,817,954 - -1.6 4,818,018 - BWI76_RS23110 0.17 -1.1 4,818,018 - BWI76_RS23110 0.17 +0.6 4,818,054 - BWI76_RS23110 0.21 -1.8 4,818,054 - BWI76_RS23110 0.21 -0.8 4,818,076 - BWI76_RS23110 0.24 +0.0 4,818,145 + BWI76_RS23110 0.33 -0.1 4,818,153 - BWI76_RS23110 0.34 -0.2 4,818,153 - BWI76_RS23110 0.34 -0.1 4,818,236 - BWI76_RS23110 0.44 +0.6 4,818,322 - BWI76_RS23110 0.54 +0.1 4,818,374 + BWI76_RS23110 0.61 -0.4 4,818,374 + BWI76_RS23110 0.61 +0.3 4,818,530 - BWI76_RS23110 0.80 -2.4 4,818,595 - BWI76_RS23110 0.88 -1.8 4,818,689 - +0.8 4,818,761 - -0.9 4,818,932 - BWI76_RS23115 0.13 -0.0 4,818,932 - BWI76_RS23115 0.13 -0.8 4,818,932 - BWI76_RS23115 0.13 +1.2 4,818,971 + BWI76_RS23115 0.16 -0.4 4,819,258 - BWI76_RS23115 0.33 +0.8 4,819,258 - BWI76_RS23115 0.33 +0.2 4,819,340 - BWI76_RS23115 0.38 -2.8 4,819,647 - BWI76_RS23115 0.56 -0.0 4,819,728 - BWI76_RS23115 0.61 -3.5 4,820,086 - BWI76_RS23115 0.83 -0.9 4,820,093 + BWI76_RS23115 0.83 -0.3 4,820,174 - BWI76_RS23115 0.88 -1.4 4,820,192 + BWI76_RS23115 0.89 -2.8 4,820,222 - +0.9 4,820,350 + +0.1 4,820,352 + -1.3 4,820,458 - BWI76_RS23120 0.11 -0.6 4,820,851 + BWI76_RS23120 0.70 +2.6 4,820,920 + BWI76_RS23120 0.81 -0.4 4,821,096 + +1.9 4,821,290 + BWI76_RS23125 0.44 -1.4
Or see this region's nucleotide sequence