Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22830

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22825 and BWI76_RS22830 are separated by 19 nucleotidesBWI76_RS22830 and BWI76_RS22835 overlap by 4 nucleotides BWI76_RS22825: BWI76_RS22825 - glucarate dehydratase, at 4,762,559 to 4,763,899 _RS22825 BWI76_RS22830: BWI76_RS22830 - glucarate dehydratase, at 4,763,919 to 4,765,259 _RS22830 BWI76_RS22835: BWI76_RS22835 - MFS transporter, at 4,765,256 to 4,766,614 _RS22835 Position (kb) 4763 4764 4765 4766Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 4762.947 kb on + strand, within BWI76_RS22825at 4762.947 kb on + strand, within BWI76_RS22825at 4762.947 kb on + strand, within BWI76_RS22825at 4762.947 kb on + strand, within BWI76_RS22825at 4762.955 kb on - strand, within BWI76_RS22825at 4763.004 kb on - strand, within BWI76_RS22825at 4763.005 kb on - strandat 4763.016 kb on - strand, within BWI76_RS22825at 4763.096 kb on + strand, within BWI76_RS22825at 4763.109 kb on - strand, within BWI76_RS22825at 4763.109 kb on - strand, within BWI76_RS22825at 4763.179 kb on + strand, within BWI76_RS22825at 4763.981 kb on - strandat 4763.987 kb on - strandat 4764.014 kb on + strandat 4764.022 kb on - strandat 4764.022 kb on - strandat 4764.027 kb on - strandat 4764.032 kb on - strandat 4764.062 kb on - strand, within BWI76_RS22830at 4764.071 kb on + strand, within BWI76_RS22830at 4764.071 kb on + strand, within BWI76_RS22830at 4764.071 kb on + strand, within BWI76_RS22830at 4764.079 kb on - strand, within BWI76_RS22830at 4764.253 kb on + strand, within BWI76_RS22830at 4764.258 kb on + strand, within BWI76_RS22830at 4764.511 kb on + strand, within BWI76_RS22830at 4764.519 kb on - strand, within BWI76_RS22830at 4764.647 kb on + strand, within BWI76_RS22830at 4764.774 kb on + strand, within BWI76_RS22830at 4764.802 kb on + strand, within BWI76_RS22830at 4764.824 kb on - strand, within BWI76_RS22830at 4764.886 kb on + strand, within BWI76_RS22830at 4765.109 kb on + strand, within BWI76_RS22830at 4765.227 kb on - strandat 4765.329 kb on + strandat 4765.330 kb on - strandat 4765.339 kb on + strandat 4765.361 kb on - strandat 4765.451 kb on - strand, within BWI76_RS22835at 4765.785 kb on + strand, within BWI76_RS22835at 4765.866 kb on + strand, within BWI76_RS22835at 4765.938 kb on - strand, within BWI76_RS22835at 4766.094 kb on - strand, within BWI76_RS22835at 4766.145 kb on + strand, within BWI76_RS22835at 4766.169 kb on + strand, within BWI76_RS22835

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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4,762,947 + BWI76_RS22825 0.29 +1.7
4,762,947 + BWI76_RS22825 0.29 -4.3
4,762,947 + BWI76_RS22825 0.29 -2.3
4,762,947 + BWI76_RS22825 0.29 -1.1
4,762,955 - BWI76_RS22825 0.30 -1.2
4,763,004 - BWI76_RS22825 0.33 -0.9
4,763,005 - -1.1
4,763,016 - BWI76_RS22825 0.34 -1.4
4,763,096 + BWI76_RS22825 0.40 -0.3
4,763,109 - BWI76_RS22825 0.41 -1.2
4,763,109 - BWI76_RS22825 0.41 -0.1
4,763,179 + BWI76_RS22825 0.46 -1.1
4,763,981 - -1.0
4,763,987 - +0.7
4,764,014 + -2.6
4,764,022 - -0.3
4,764,022 - +1.5
4,764,027 - +0.8
4,764,032 - -3.2
4,764,062 - BWI76_RS22830 0.11 -1.0
4,764,071 + BWI76_RS22830 0.11 -1.6
4,764,071 + BWI76_RS22830 0.11 -1.6
4,764,071 + BWI76_RS22830 0.11 -2.8
4,764,079 - BWI76_RS22830 0.12 -1.1
4,764,253 + BWI76_RS22830 0.25 -4.0
4,764,258 + BWI76_RS22830 0.25 +1.6
4,764,511 + BWI76_RS22830 0.44 +0.4
4,764,519 - BWI76_RS22830 0.45 -0.4
4,764,647 + BWI76_RS22830 0.54 +1.4
4,764,774 + BWI76_RS22830 0.64 -3.5
4,764,802 + BWI76_RS22830 0.66 -3.1
4,764,824 - BWI76_RS22830 0.67 +0.0
4,764,886 + BWI76_RS22830 0.72 +0.1
4,765,109 + BWI76_RS22830 0.89 -2.7
4,765,227 - +0.2
4,765,329 + -1.1
4,765,330 - -1.7
4,765,339 + -3.6
4,765,361 - -2.0
4,765,451 - BWI76_RS22835 0.14 -0.3
4,765,785 + BWI76_RS22835 0.39 +1.3
4,765,866 + BWI76_RS22835 0.45 +0.7
4,765,938 - BWI76_RS22835 0.50 -0.3
4,766,094 - BWI76_RS22835 0.62 -2.4
4,766,145 + BWI76_RS22835 0.65 -2.6
4,766,169 + BWI76_RS22835 0.67 -2.3

Or see this region's nucleotide sequence