Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22365 and BWI76_RS22370 are separated by 258 nucleotides BWI76_RS22370 and BWI76_RS22375 are separated by 117 nucleotides
BWI76_RS22365: BWI76_RS22365 - hydrogenase expression/formation protein HypE, at 4,660,584 to 4,661,594
_RS22365
BWI76_RS22370: BWI76_RS22370 - transcriptional regulator FhlA, at 4,661,853 to 4,663,925
_RS22370
BWI76_RS22375: BWI76_RS22375 - pectin acetylesterase, at 4,664,043 to 4,664,990
_RS22375
Position (kb)
4661
4662
4663
4664 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4661.187 kb on + strand, within BWI76_RS22365 at 4661.235 kb on + strand, within BWI76_RS22365 at 4661.416 kb on - strand, within BWI76_RS22365 at 4661.524 kb on + strand at 4661.639 kb on + strand at 4661.653 kb on - strand at 4662.124 kb on - strand, within BWI76_RS22370 at 4662.147 kb on - strand, within BWI76_RS22370 at 4662.375 kb on - strand, within BWI76_RS22370 at 4662.433 kb on + strand, within BWI76_RS22370 at 4662.439 kb on - strand, within BWI76_RS22370 at 4662.523 kb on + strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.531 kb on - strand, within BWI76_RS22370 at 4662.560 kb on + strand, within BWI76_RS22370 at 4662.693 kb on - strand, within BWI76_RS22370 at 4662.770 kb on - strand, within BWI76_RS22370 at 4662.783 kb on - strand, within BWI76_RS22370 at 4662.965 kb on + strand, within BWI76_RS22370 at 4663.034 kb on + strand, within BWI76_RS22370 at 4663.065 kb on + strand, within BWI76_RS22370 at 4663.065 kb on + strand, within BWI76_RS22370 at 4663.755 kb on - strand at 4664.374 kb on - strand, within BWI76_RS22375 at 4664.410 kb on + strand, within BWI76_RS22375 at 4664.418 kb on - strand, within BWI76_RS22375 at 4664.420 kb on + strand, within BWI76_RS22375 at 4664.641 kb on - strand, within BWI76_RS22375 at 4664.752 kb on - strand, within BWI76_RS22375 at 4664.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 4,661,187 + BWI76_RS22365 0.60 -1.0 4,661,235 + BWI76_RS22365 0.64 -1.3 4,661,416 - BWI76_RS22365 0.82 -0.5 4,661,524 + -1.3 4,661,639 + -0.2 4,661,653 - -0.9 4,662,124 - BWI76_RS22370 0.13 -0.1 4,662,147 - BWI76_RS22370 0.14 -1.1 4,662,375 - BWI76_RS22370 0.25 +0.1 4,662,433 + BWI76_RS22370 0.28 -1.4 4,662,439 - BWI76_RS22370 0.28 +0.4 4,662,523 + BWI76_RS22370 0.32 -0.1 4,662,531 - BWI76_RS22370 0.33 -1.7 4,662,531 - BWI76_RS22370 0.33 -2.3 4,662,560 + BWI76_RS22370 0.34 +0.1 4,662,693 - BWI76_RS22370 0.41 -0.4 4,662,770 - BWI76_RS22370 0.44 +1.9 4,662,783 - BWI76_RS22370 0.45 +0.2 4,662,965 + BWI76_RS22370 0.54 -1.2 4,663,034 + BWI76_RS22370 0.57 -1.1 4,663,065 + BWI76_RS22370 0.58 -0.7 4,663,065 + BWI76_RS22370 0.58 -1.0 4,663,755 - +0.2 4,664,374 - BWI76_RS22375 0.35 -2.4 4,664,410 + BWI76_RS22375 0.39 +3.8 4,664,418 - BWI76_RS22375 0.40 -0.5 4,664,420 + BWI76_RS22375 0.40 +0.9 4,664,641 - BWI76_RS22375 0.63 -2.2 4,664,752 - BWI76_RS22375 0.75 +0.2 4,664,921 - -1.8
Or see this region's nucleotide sequence