Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21760 and BWI76_RS21765 are separated by 105 nucleotides BWI76_RS21765 and BWI76_RS21770 are separated by 90 nucleotides BWI76_RS21770 and BWI76_RS21775 are separated by 329 nucleotides
BWI76_RS21760: BWI76_RS21760 - SMP-30/gluconolactonase/LRE family protein, at 4,547,965 to 4,548,825
_RS21760
BWI76_RS21765: BWI76_RS21765 - NmrA family protein, at 4,548,931 to 4,549,884
_RS21765
BWI76_RS21770: BWI76_RS21770 - HxlR family transcriptional regulator, at 4,549,975 to 4,550,388
_RS21770
BWI76_RS21775: BWI76_RS21775 - alpha/beta hydrolase, at 4,550,718 to 4,551,673
_RS21775
Position (kb)
4548
4549
4550 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 4548.139 kb on - strand, within BWI76_RS21760 at 4548.267 kb on - strand, within BWI76_RS21760 at 4548.386 kb on + strand, within BWI76_RS21760 at 4548.439 kb on + strand, within BWI76_RS21760 at 4548.489 kb on - strand, within BWI76_RS21760 at 4548.564 kb on + strand, within BWI76_RS21760 at 4548.637 kb on + strand, within BWI76_RS21760 at 4548.655 kb on + strand, within BWI76_RS21760 at 4548.710 kb on - strand, within BWI76_RS21760 at 4548.710 kb on - strand, within BWI76_RS21760 at 4548.820 kb on + strand at 4548.828 kb on - strand at 4549.045 kb on - strand, within BWI76_RS21765 at 4549.128 kb on - strand, within BWI76_RS21765 at 4549.184 kb on - strand, within BWI76_RS21765 at 4549.186 kb on + strand, within BWI76_RS21765 at 4549.194 kb on - strand, within BWI76_RS21765 at 4549.253 kb on + strand, within BWI76_RS21765 at 4549.272 kb on + strand, within BWI76_RS21765 at 4549.333 kb on + strand, within BWI76_RS21765 at 4549.409 kb on + strand, within BWI76_RS21765 at 4549.472 kb on - strand, within BWI76_RS21765 at 4549.499 kb on + strand, within BWI76_RS21765 at 4549.555 kb on - strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.597 kb on + strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.605 kb on - strand, within BWI76_RS21765 at 4549.659 kb on - strand, within BWI76_RS21765 at 4549.733 kb on - strand, within BWI76_RS21765 at 4549.812 kb on + strand at 4549.819 kb on + strand at 4549.822 kb on - strand at 4550.019 kb on - strand, within BWI76_RS21770 at 4550.022 kb on + strand, within BWI76_RS21770 at 4550.029 kb on - strand, within BWI76_RS21770 at 4550.056 kb on + strand, within BWI76_RS21770 at 4550.056 kb on + strand, within BWI76_RS21770 at 4550.056 kb on + strand, within BWI76_RS21770 at 4550.064 kb on - strand, within BWI76_RS21770 at 4550.064 kb on - strand, within BWI76_RS21770 at 4550.102 kb on + strand, within BWI76_RS21770 at 4550.156 kb on + strand, within BWI76_RS21770 at 4550.166 kb on + strand, within BWI76_RS21770 at 4550.169 kb on - strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.183 kb on + strand, within BWI76_RS21770 at 4550.191 kb on - strand, within BWI76_RS21770 at 4550.201 kb on - strand, within BWI76_RS21770 at 4550.209 kb on + strand, within BWI76_RS21770 at 4550.224 kb on + strand, within BWI76_RS21770 at 4550.256 kb on + strand, within BWI76_RS21770 at 4550.262 kb on + strand at 4550.262 kb on + strand, within BWI76_RS21770 at 4550.270 kb on - strand, within BWI76_RS21770 at 4550.270 kb on - strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.272 kb on + strand, within BWI76_RS21770 at 4550.280 kb on - strand, within BWI76_RS21770 at 4550.280 kb on - strand, within BWI76_RS21770 at 4550.280 kb on - strand, within BWI76_RS21770 at 4550.280 kb on - strand, within BWI76_RS21770 at 4550.287 kb on + strand, within BWI76_RS21770 at 4550.292 kb on + strand, within BWI76_RS21770 at 4550.307 kb on + strand, within BWI76_RS21770 at 4550.384 kb on - strand at 4550.429 kb on + strand at 4550.438 kb on + strand at 4550.457 kb on + strand at 4550.469 kb on + strand at 4550.471 kb on + strand at 4550.479 kb on + strand at 4550.479 kb on + strand at 4550.479 kb on + strand at 4550.483 kb on + strand at 4550.493 kb on + strand at 4550.503 kb on + strand at 4550.503 kb on + strand at 4550.503 kb on + strand at 4550.841 kb on + strand, within BWI76_RS21775 at 4550.849 kb on - strand, within BWI76_RS21775
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 4,548,139 - BWI76_RS21760 0.20 -0.6 4,548,267 - BWI76_RS21760 0.35 +0.4 4,548,386 + BWI76_RS21760 0.49 -3.4 4,548,439 + BWI76_RS21760 0.55 -0.5 4,548,489 - BWI76_RS21760 0.61 +0.4 4,548,564 + BWI76_RS21760 0.70 -0.2 4,548,637 + BWI76_RS21760 0.78 -3.2 4,548,655 + BWI76_RS21760 0.80 +0.8 4,548,710 - BWI76_RS21760 0.87 +0.7 4,548,710 - BWI76_RS21760 0.87 -1.2 4,548,820 + -1.4 4,548,828 - -1.7 4,549,045 - BWI76_RS21765 0.12 +1.1 4,549,128 - BWI76_RS21765 0.21 -0.4 4,549,184 - BWI76_RS21765 0.27 +3.3 4,549,186 + BWI76_RS21765 0.27 -1.1 4,549,194 - BWI76_RS21765 0.28 -1.9 4,549,253 + BWI76_RS21765 0.34 -1.5 4,549,272 + BWI76_RS21765 0.36 -2.5 4,549,333 + BWI76_RS21765 0.42 -0.2 4,549,409 + BWI76_RS21765 0.50 +1.6 4,549,472 - BWI76_RS21765 0.57 +0.2 4,549,499 + BWI76_RS21765 0.60 -2.6 4,549,555 - BWI76_RS21765 0.65 -0.7 4,549,597 + BWI76_RS21765 0.70 +2.0 4,549,597 + BWI76_RS21765 0.70 -2.4 4,549,597 + BWI76_RS21765 0.70 -0.6 4,549,597 + BWI76_RS21765 0.70 +1.4 4,549,597 + BWI76_RS21765 0.70 -0.5 4,549,605 - BWI76_RS21765 0.71 -1.3 4,549,605 - BWI76_RS21765 0.71 +0.6 4,549,605 - BWI76_RS21765 0.71 -1.8 4,549,605 - BWI76_RS21765 0.71 -0.8 4,549,605 - BWI76_RS21765 0.71 -1.6 4,549,659 - BWI76_RS21765 0.76 -3.6 4,549,733 - BWI76_RS21765 0.84 -0.2 4,549,812 + -0.8 4,549,819 + +0.8 4,549,822 - +0.2 4,550,019 - BWI76_RS21770 0.11 -5.3 4,550,022 + BWI76_RS21770 0.11 -0.4 4,550,029 - BWI76_RS21770 0.13 +0.2 4,550,056 + BWI76_RS21770 0.20 -2.0 4,550,056 + BWI76_RS21770 0.20 +0.4 4,550,056 + BWI76_RS21770 0.20 -0.2 4,550,064 - BWI76_RS21770 0.21 -1.8 4,550,064 - BWI76_RS21770 0.21 +0.4 4,550,102 + BWI76_RS21770 0.31 -3.0 4,550,156 + BWI76_RS21770 0.44 +1.3 4,550,166 + BWI76_RS21770 0.46 -1.5 4,550,169 - BWI76_RS21770 0.47 -0.4 4,550,183 + BWI76_RS21770 0.50 -0.0 4,550,183 + BWI76_RS21770 0.50 +0.3 4,550,183 + BWI76_RS21770 0.50 +0.3 4,550,183 + BWI76_RS21770 0.50 -1.4 4,550,183 + BWI76_RS21770 0.50 +0.4 4,550,183 + BWI76_RS21770 0.50 -2.9 4,550,183 + BWI76_RS21770 0.50 -3.3 4,550,191 - BWI76_RS21770 0.52 -0.3 4,550,201 - BWI76_RS21770 0.55 -1.4 4,550,209 + BWI76_RS21770 0.57 -0.1 4,550,224 + BWI76_RS21770 0.60 -2.3 4,550,256 + BWI76_RS21770 0.68 -0.9 4,550,262 + +0.1 4,550,262 + BWI76_RS21770 0.69 -1.5 4,550,270 - BWI76_RS21770 0.71 -3.3 4,550,270 - BWI76_RS21770 0.71 +2.4 4,550,272 + BWI76_RS21770 0.72 -0.9 4,550,272 + BWI76_RS21770 0.72 -0.7 4,550,272 + BWI76_RS21770 0.72 -2.8 4,550,272 + BWI76_RS21770 0.72 -1.1 4,550,272 + BWI76_RS21770 0.72 -2.6 4,550,272 + BWI76_RS21770 0.72 -0.8 4,550,272 + BWI76_RS21770 0.72 +2.2 4,550,272 + BWI76_RS21770 0.72 +2.4 4,550,280 - BWI76_RS21770 0.74 -1.7 4,550,280 - BWI76_RS21770 0.74 -2.0 4,550,280 - BWI76_RS21770 0.74 -1.2 4,550,280 - BWI76_RS21770 0.74 +1.9 4,550,287 + BWI76_RS21770 0.75 +2.1 4,550,292 + BWI76_RS21770 0.77 -0.9 4,550,307 + BWI76_RS21770 0.80 -1.5 4,550,384 - -3.8 4,550,429 + -1.8 4,550,438 + -2.9 4,550,457 + +2.4 4,550,469 + +0.1 4,550,471 + -2.8 4,550,479 + +0.3 4,550,479 + -0.9 4,550,479 + +0.7 4,550,483 + -2.2 4,550,493 + +0.9 4,550,503 + +1.6 4,550,503 + -0.5 4,550,503 + +1.0 4,550,841 + BWI76_RS21775 0.13 -4.1 4,550,849 - BWI76_RS21775 0.14 -2.6
Or see this region's nucleotide sequence