Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18735 and BWI76_RS18740 are separated by 49 nucleotides BWI76_RS18740 and BWI76_RS18745 are separated by 185 nucleotides BWI76_RS18745 and BWI76_RS18750 are separated by 131 nucleotides BWI76_RS18750 and BWI76_RS18755 are separated by 39 nucleotides
BWI76_RS18735: BWI76_RS18735 - tautomerase family protein, at 3,884,275 to 3,884,664
_RS18735
BWI76_RS18740: BWI76_RS18740 - HPP family protein, at 3,884,714 to 3,885,445
_RS18740
BWI76_RS18745: BWI76_RS18745 - adenosylhomocysteinase, at 3,885,631 to 3,886,740
_RS18745
BWI76_RS18750: BWI76_RS18750 - adenosylcobinamide-GDP ribazoletransferase, at 3,886,872 to 3,887,612
_RS18750
BWI76_RS18755: BWI76_RS18755 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 3,887,652 to 3,887,885
_RS18755
Position (kb)
3885
3886
3887 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3884.667 kb on - strand at 3884.688 kb on + strand at 3884.876 kb on - strand, within BWI76_RS18740 at 3884.876 kb on - strand, within BWI76_RS18740 at 3885.111 kb on + strand, within BWI76_RS18740 at 3885.158 kb on + strand, within BWI76_RS18740 at 3885.192 kb on + strand, within BWI76_RS18740 at 3885.591 kb on - strand at 3885.673 kb on + strand at 3885.741 kb on - strand at 3885.838 kb on + strand, within BWI76_RS18745 at 3886.136 kb on - strand, within BWI76_RS18745 at 3886.851 kb on - strand at 3887.025 kb on + strand, within BWI76_RS18750 at 3887.114 kb on - strand, within BWI76_RS18750 at 3887.695 kb on + strand, within BWI76_RS18755
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 3,884,667 - -0.2 3,884,688 + +1.1 3,884,876 - BWI76_RS18740 0.22 -2.6 3,884,876 - BWI76_RS18740 0.22 -1.7 3,885,111 + BWI76_RS18740 0.54 +0.1 3,885,158 + BWI76_RS18740 0.61 -0.5 3,885,192 + BWI76_RS18740 0.65 +1.2 3,885,591 - -2.1 3,885,673 + -2.1 3,885,741 - -0.2 3,885,838 + BWI76_RS18745 0.19 -1.1 3,886,136 - BWI76_RS18745 0.45 -0.4 3,886,851 - -2.9 3,887,025 + BWI76_RS18750 0.21 +1.2 3,887,114 - BWI76_RS18750 0.33 -1.6 3,887,695 + BWI76_RS18755 0.18 -3.1
Or see this region's nucleotide sequence