Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15340 and BWI76_RS15345 are separated by 176 nucleotides BWI76_RS15345 and BWI76_RS15350 are separated by 149 nucleotides BWI76_RS15350 and BWI76_RS15355 are separated by 67 nucleotides
BWI76_RS15340: BWI76_RS15340 - urea ABC transporter substrate-binding protein, at 3,212,576 to 3,213,847
_RS15340
BWI76_RS15345: BWI76_RS15345 - 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase, at 3,214,024 to 3,215,127
_RS15345
BWI76_RS15350: BWI76_RS15350 - hypothetical protein, at 3,215,277 to 3,215,669
_RS15350
BWI76_RS15355: BWI76_RS15355 - transcriptional regulator FtrA, at 3,215,737 to 3,216,747
_RS15355
Position (kb)
3214
3215
3216 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3213.110 kb on - strand, within BWI76_RS15340 at 3213.476 kb on - strand, within BWI76_RS15340 at 3213.488 kb on - strand, within BWI76_RS15340 at 3213.794 kb on + strand at 3213.795 kb on - strand at 3213.797 kb on + strand at 3213.856 kb on + strand at 3213.856 kb on + strand at 3213.856 kb on + strand at 3213.864 kb on - strand at 3213.864 kb on - strand at 3213.957 kb on - strand at 3214.012 kb on + strand at 3214.033 kb on - strand at 3214.040 kb on - strand at 3214.159 kb on - strand, within BWI76_RS15345 at 3214.451 kb on + strand, within BWI76_RS15345 at 3214.489 kb on + strand, within BWI76_RS15345 at 3214.554 kb on - strand, within BWI76_RS15345 at 3214.844 kb on - strand, within BWI76_RS15345 at 3215.104 kb on + strand at 3215.295 kb on + strand at 3215.297 kb on - strand at 3215.303 kb on - strand at 3215.354 kb on - strand, within BWI76_RS15350 at 3216.042 kb on + strand, within BWI76_RS15355 at 3216.052 kb on + strand, within BWI76_RS15355
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 3,213,110 - BWI76_RS15340 0.42 -0.1 3,213,476 - BWI76_RS15340 0.71 -1.6 3,213,488 - BWI76_RS15340 0.72 -0.0 3,213,794 + +0.3 3,213,795 - -0.6 3,213,797 + -0.4 3,213,856 + +0.5 3,213,856 + -2.4 3,213,856 + -3.0 3,213,864 - -2.8 3,213,864 - -1.2 3,213,957 - +0.5 3,214,012 + -2.3 3,214,033 - -1.7 3,214,040 - +0.9 3,214,159 - BWI76_RS15345 0.12 -1.3 3,214,451 + BWI76_RS15345 0.39 +0.6 3,214,489 + BWI76_RS15345 0.42 -1.6 3,214,554 - BWI76_RS15345 0.48 -3.0 3,214,844 - BWI76_RS15345 0.74 +0.3 3,215,104 + -3.4 3,215,295 + -2.3 3,215,297 - -2.3 3,215,303 - -0.3 3,215,354 - BWI76_RS15350 0.20 -3.4 3,216,042 + BWI76_RS15355 0.30 -1.6 3,216,052 + BWI76_RS15355 0.31 -1.3
Or see this region's nucleotide sequence