Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13640

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13635 and BWI76_RS13640 are separated by 278 nucleotidesBWI76_RS13640 and BWI76_RS13645 are separated by 76 nucleotides BWI76_RS13635: BWI76_RS13635 - extracellular solute-binding protein, at 2,841,503 to 2,842,471 _RS13635 BWI76_RS13640: BWI76_RS13640 - binding-protein-dependent transport system inner membrane protein, at 2,842,750 to 2,844,405 _RS13640 BWI76_RS13645: BWI76_RS13645 - N-hydroxyarylamine O-acetyltransferase, at 2,844,482 to 2,845,327 _RS13645 Position (kb) 2842 2843 2844 2845Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2841.823 kb on + strand, within BWI76_RS13635at 2842.030 kb on - strand, within BWI76_RS13635at 2842.254 kb on - strand, within BWI76_RS13635at 2842.957 kb on + strand, within BWI76_RS13640at 2843.913 kb on + strand, within BWI76_RS13640at 2843.990 kb on - strand, within BWI76_RS13640at 2844.089 kb on - strand, within BWI76_RS13640at 2844.310 kb on + strandat 2844.531 kb on + strandat 2844.714 kb on - strand, within BWI76_RS13645at 2844.732 kb on + strand, within BWI76_RS13645at 2844.986 kb on - strand, within BWI76_RS13645at 2845.315 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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2,841,823 + BWI76_RS13635 0.33 -0.2
2,842,030 - BWI76_RS13635 0.54 -2.7
2,842,254 - BWI76_RS13635 0.78 +1.4
2,842,957 + BWI76_RS13640 0.12 -2.3
2,843,913 + BWI76_RS13640 0.70 -1.3
2,843,990 - BWI76_RS13640 0.75 -2.2
2,844,089 - BWI76_RS13640 0.81 -0.8
2,844,310 + +0.5
2,844,531 + -3.8
2,844,714 - BWI76_RS13645 0.27 -1.4
2,844,732 + BWI76_RS13645 0.30 +2.6
2,844,986 - BWI76_RS13645 0.60 -0.5
2,845,315 - -1.7

Or see this region's nucleotide sequence