Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13490 and BWI76_RS13495 are separated by 291 nucleotides BWI76_RS13495 and BWI76_RS13500 are separated by 72 nucleotides BWI76_RS13500 and BWI76_RS13505 are separated by 263 nucleotides
BWI76_RS13490: BWI76_RS13490 - pyrimidine-specific ribonucleoside hydrolase RihA, at 2,812,005 to 2,812,940
_RS13490
BWI76_RS13495: BWI76_RS13495 - hypothetical protein, at 2,813,232 to 2,813,531
_RS13495
BWI76_RS13500: BWI76_RS13500 - TonB-dependent receptor, at 2,813,604 to 2,815,715
_RS13500
BWI76_RS13505: BWI76_RS13505 - putative receptor, at 2,815,979 to 2,817,040
_RS13505
Position (kb)
2813
2814
2815
2816 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6
7
8
9 at 2812.646 kb on - strand at 2812.768 kb on + strand, within BWI76_RS13490 at 2812.864 kb on + strand at 2813.007 kb on + strand at 2813.007 kb on + strand at 2813.007 kb on + strand at 2813.020 kb on - strand at 2813.025 kb on - strand at 2813.247 kb on + strand at 2813.259 kb on + strand at 2813.259 kb on + strand at 2813.267 kb on - strand, within BWI76_RS13495 at 2813.267 kb on - strand, within BWI76_RS13495 at 2813.455 kb on + strand, within BWI76_RS13495 at 2813.548 kb on + strand at 2813.800 kb on + strand at 2814.008 kb on - strand, within BWI76_RS13500 at 2814.230 kb on + strand, within BWI76_RS13500 at 2814.321 kb on + strand, within BWI76_RS13500 at 2814.445 kb on + strand, within BWI76_RS13500 at 2814.691 kb on - strand, within BWI76_RS13500 at 2814.863 kb on - strand, within BWI76_RS13500 at 2814.993 kb on - strand, within BWI76_RS13500 at 2814.993 kb on - strand, within BWI76_RS13500 at 2815.604 kb on + strand at 2815.626 kb on - strand at 2815.628 kb on + strand at 2816.143 kb on + strand, within BWI76_RS13505 at 2816.197 kb on - strand, within BWI76_RS13505 at 2816.249 kb on - strand, within BWI76_RS13505 at 2816.276 kb on + strand, within BWI76_RS13505 at 2816.490 kb on + strand, within BWI76_RS13505 at 2816.516 kb on + strand, within BWI76_RS13505
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 2,812,646 - +0.7 2,812,768 + BWI76_RS13490 0.82 +2.0 2,812,864 + -0.9 2,813,007 + -1.5 2,813,007 + -0.7 2,813,007 + +1.2 2,813,020 - +2.9 2,813,025 - +0.2 2,813,247 + +1.2 2,813,259 + -0.4 2,813,259 + +0.0 2,813,267 - BWI76_RS13495 0.12 +0.3 2,813,267 - BWI76_RS13495 0.12 -0.3 2,813,455 + BWI76_RS13495 0.74 +0.6 2,813,548 + -1.8 2,813,800 + +8.1 2,814,008 - BWI76_RS13500 0.19 +8.3 2,814,230 + BWI76_RS13500 0.30 +8.4 2,814,321 + BWI76_RS13500 0.34 +8.3 2,814,445 + BWI76_RS13500 0.40 +9.4 2,814,691 - BWI76_RS13500 0.51 +9.3 2,814,863 - BWI76_RS13500 0.60 +8.4 2,814,993 - BWI76_RS13500 0.66 +8.1 2,814,993 - BWI76_RS13500 0.66 +8.7 2,815,604 + +8.3 2,815,626 - +8.5 2,815,628 + +7.9 2,816,143 + BWI76_RS13505 0.15 +1.1 2,816,197 - BWI76_RS13505 0.21 +1.1 2,816,249 - BWI76_RS13505 0.25 -1.4 2,816,276 + BWI76_RS13505 0.28 -2.1 2,816,490 + BWI76_RS13505 0.48 -0.8 2,816,516 + BWI76_RS13505 0.51 +0.1
Or see this region's nucleotide sequence