Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11735

Experiment: K. M5a1 KLEB26 MOI 0.1

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS11730 and BWI76_RS11735 are separated by 53 nucleotidesBWI76_RS11735 and BWI76_RS11740 are separated by 12 nucleotidesBWI76_RS11740 and BWI76_RS11745 are separated by 102 nucleotides BWI76_RS11730: BWI76_RS11730 - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 2,467,686 to 2,469,044 _RS11730 BWI76_RS11735: BWI76_RS11735 - PTS N,N'-diacetylchitobiose transporter subunit IIA, at 2,469,098 to 2,469,445 _RS11735 BWI76_RS11740: BWI76_RS11740 - transcriptional regulator ChbR, at 2,469,458 to 2,470,297 _RS11740 BWI76_RS11745: BWI76_RS11745 - 6-phospho-beta-glucosidase, at 2,470,400 to 2,471,746 _RS11745 Position (kb) 2469 2470Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2468.106 kb on + strand, within BWI76_RS11730at 2468.152 kb on + strand, within BWI76_RS11730at 2468.152 kb on + strand, within BWI76_RS11730at 2468.160 kb on - strand, within BWI76_RS11730at 2468.160 kb on - strand, within BWI76_RS11730at 2468.265 kb on + strand, within BWI76_RS11730at 2468.331 kb on - strand, within BWI76_RS11730at 2468.366 kb on - strand, within BWI76_RS11730at 2468.379 kb on + strand, within BWI76_RS11730at 2468.436 kb on - strand, within BWI76_RS11730at 2468.462 kb on - strand, within BWI76_RS11730at 2468.636 kb on + strand, within BWI76_RS11730at 2468.672 kb on + strand, within BWI76_RS11730at 2468.755 kb on + strand, within BWI76_RS11730at 2468.808 kb on + strand, within BWI76_RS11730at 2468.816 kb on - strand, within BWI76_RS11730at 2468.890 kb on - strand, within BWI76_RS11730at 2468.989 kb on + strandat 2469.088 kb on - strandat 2469.128 kb on - strandat 2469.162 kb on - strand, within BWI76_RS11735at 2469.185 kb on - strandat 2469.207 kb on - strand, within BWI76_RS11735at 2469.370 kb on + strand, within BWI76_RS11735at 2469.487 kb on + strandat 2469.487 kb on + strandat 2469.495 kb on - strandat 2469.549 kb on + strand, within BWI76_RS11740at 2469.561 kb on + strand, within BWI76_RS11740at 2469.569 kb on - strand, within BWI76_RS11740at 2469.578 kb on - strandat 2469.578 kb on - strand, within BWI76_RS11740at 2469.578 kb on - strand, within BWI76_RS11740at 2469.601 kb on - strand, within BWI76_RS11740at 2469.629 kb on - strand, within BWI76_RS11740at 2469.629 kb on - strand, within BWI76_RS11740at 2469.650 kb on + strand, within BWI76_RS11740at 2469.681 kb on - strand, within BWI76_RS11740at 2469.781 kb on + strand, within BWI76_RS11740at 2469.781 kb on + strand, within BWI76_RS11740at 2469.794 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.941 kb on + strand, within BWI76_RS11740at 2469.947 kb on - strandat 2469.947 kb on - strand, within BWI76_RS11740at 2469.947 kb on - strandat 2469.950 kb on - strand, within BWI76_RS11740at 2470.066 kb on + strand, within BWI76_RS11740at 2470.074 kb on - strand, within BWI76_RS11740at 2470.154 kb on + strand, within BWI76_RS11740at 2470.155 kb on + strand, within BWI76_RS11740at 2470.166 kb on + strand, within BWI76_RS11740at 2470.191 kb on + strand, within BWI76_RS11740at 2470.201 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.202 kb on + strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.210 kb on - strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on + strand, within BWI76_RS11740at 2470.212 kb on - strand, within BWI76_RS11740at 2470.220 kb on - strandat 2470.251 kb on + strandat 2470.251 kb on + strandat 2470.251 kb on + strandat 2470.251 kb on + strandat 2470.258 kb on + strandat 2470.259 kb on - strandat 2470.259 kb on - strandat 2470.259 kb on - strandat 2470.259 kb on - strandat 2470.269 kb on + strandat 2470.302 kb on + strandat 2470.365 kb on - strandat 2470.371 kb on + strandat 2470.371 kb on + strandat 2470.379 kb on - strandat 2470.379 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
remove
2,468,106 + BWI76_RS11730 0.31 -0.7
2,468,152 + BWI76_RS11730 0.34 -2.5
2,468,152 + BWI76_RS11730 0.34 +0.1
2,468,160 - BWI76_RS11730 0.35 -1.0
2,468,160 - BWI76_RS11730 0.35 +1.3
2,468,265 + BWI76_RS11730 0.43 -0.2
2,468,331 - BWI76_RS11730 0.47 +5.7
2,468,366 - BWI76_RS11730 0.50 -0.2
2,468,379 + BWI76_RS11730 0.51 -2.2
2,468,436 - BWI76_RS11730 0.55 -3.6
2,468,462 - BWI76_RS11730 0.57 -4.2
2,468,636 + BWI76_RS11730 0.70 -0.4
2,468,672 + BWI76_RS11730 0.73 -2.8
2,468,755 + BWI76_RS11730 0.79 -1.0
2,468,808 + BWI76_RS11730 0.83 -3.5
2,468,816 - BWI76_RS11730 0.83 +0.6
2,468,890 - BWI76_RS11730 0.89 -2.0
2,468,989 + -0.4
2,469,088 - -1.8
2,469,128 - -0.5
2,469,162 - BWI76_RS11735 0.18 -2.6
2,469,185 - +2.7
2,469,207 - BWI76_RS11735 0.31 -2.1
2,469,370 + BWI76_RS11735 0.78 -1.5
2,469,487 + +0.7
2,469,487 + -4.1
2,469,495 - +0.0
2,469,549 + BWI76_RS11740 0.11 -0.4
2,469,561 + BWI76_RS11740 0.12 +1.3
2,469,569 - BWI76_RS11740 0.13 -3.7
2,469,578 - +0.7
2,469,578 - BWI76_RS11740 0.14 -1.3
2,469,578 - BWI76_RS11740 0.14 +0.7
2,469,601 - BWI76_RS11740 0.17 +0.4
2,469,629 - BWI76_RS11740 0.20 -2.5
2,469,629 - BWI76_RS11740 0.20 -2.5
2,469,650 + BWI76_RS11740 0.23 -1.8
2,469,681 - BWI76_RS11740 0.27 +3.1
2,469,781 + BWI76_RS11740 0.38 -1.5
2,469,781 + BWI76_RS11740 0.38 +0.6
2,469,794 + BWI76_RS11740 0.40 -1.2
2,469,808 + BWI76_RS11740 0.42 -2.0
2,469,808 + BWI76_RS11740 0.42 -0.9
2,469,808 + BWI76_RS11740 0.42 +2.3
2,469,808 + BWI76_RS11740 0.42 -1.4
2,469,808 + BWI76_RS11740 0.42 +0.7
2,469,808 + BWI76_RS11740 0.42 -0.7
2,469,808 + BWI76_RS11740 0.42 +1.3
2,469,808 + BWI76_RS11740 0.42 -1.1
2,469,808 + BWI76_RS11740 0.42 -0.7
2,469,808 + BWI76_RS11740 0.42 +0.3
2,469,816 - BWI76_RS11740 0.43 -0.3
2,469,816 - BWI76_RS11740 0.43 -0.0
2,469,816 - BWI76_RS11740 0.43 +1.6
2,469,816 - BWI76_RS11740 0.43 -0.7
2,469,816 - BWI76_RS11740 0.43 -0.5
2,469,939 + BWI76_RS11740 0.57 -1.4
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,939 + BWI76_RS11740 0.57 -1.3
2,469,939 + BWI76_RS11740 0.57 -1.4
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,939 + BWI76_RS11740 0.57 -0.3
2,469,939 + BWI76_RS11740 0.57 +0.7
2,469,939 + BWI76_RS11740 0.57 -0.9
2,469,939 + BWI76_RS11740 0.57 -0.9
2,469,939 + BWI76_RS11740 0.57 -2.6
2,469,939 + BWI76_RS11740 0.57 -3.0
2,469,939 + BWI76_RS11740 0.57 -1.9
2,469,939 + BWI76_RS11740 0.57 -1.0
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,941 + BWI76_RS11740 0.57 +0.7
2,469,947 - +4.6
2,469,947 - BWI76_RS11740 0.58 +0.9
2,469,947 - +2.3
2,469,950 - BWI76_RS11740 0.59 -2.0
2,470,066 + BWI76_RS11740 0.72 +0.4
2,470,074 - BWI76_RS11740 0.73 +2.3
2,470,154 + BWI76_RS11740 0.83 -1.0
2,470,155 + BWI76_RS11740 0.83 -0.5
2,470,166 + BWI76_RS11740 0.84 -1.6
2,470,191 + BWI76_RS11740 0.87 -0.0
2,470,201 + BWI76_RS11740 0.88 -2.0
2,470,202 + BWI76_RS11740 0.89 -0.5
2,470,202 + BWI76_RS11740 0.89 -0.9
2,470,202 + BWI76_RS11740 0.89 -3.2
2,470,202 + BWI76_RS11740 0.89 -0.1
2,470,202 + BWI76_RS11740 0.89 +0.1
2,470,202 + BWI76_RS11740 0.89 -1.2
2,470,202 + BWI76_RS11740 0.89 -2.0
2,470,202 + BWI76_RS11740 0.89 +0.4
2,470,202 + BWI76_RS11740 0.89 -1.9
2,470,202 + BWI76_RS11740 0.89 +0.7
2,470,202 + BWI76_RS11740 0.89 -2.9
2,470,202 + BWI76_RS11740 0.89 +0.0
2,470,202 + BWI76_RS11740 0.89 -0.1
2,470,202 + BWI76_RS11740 0.89 +0.9
2,470,202 + BWI76_RS11740 0.89 -2.1
2,470,202 + BWI76_RS11740 0.89 -0.9
2,470,202 + BWI76_RS11740 0.89 -1.0
2,470,202 + BWI76_RS11740 0.89 +1.0
2,470,202 + BWI76_RS11740 0.89 -2.6
2,470,202 + BWI76_RS11740 0.89 -1.7
2,470,202 + BWI76_RS11740 0.89 +1.6
2,470,202 + BWI76_RS11740 0.89 +1.0
2,470,202 + BWI76_RS11740 0.89 +0.7
2,470,210 - BWI76_RS11740 0.90 -1.7
2,470,210 - BWI76_RS11740 0.90 +0.7
2,470,210 - BWI76_RS11740 0.90 -0.0
2,470,210 - BWI76_RS11740 0.90 -0.0
2,470,210 - BWI76_RS11740 0.90 -0.0
2,470,210 - BWI76_RS11740 0.90 +0.3
2,470,212 + BWI76_RS11740 0.90 +1.3
2,470,212 + BWI76_RS11740 0.90 -0.3
2,470,212 + BWI76_RS11740 0.90 -0.3
2,470,212 + BWI76_RS11740 0.90 -3.1
2,470,212 + BWI76_RS11740 0.90 -1.7
2,470,212 + BWI76_RS11740 0.90 +1.4
2,470,212 - BWI76_RS11740 0.90 +0.3
2,470,220 - -0.3
2,470,251 + -2.5
2,470,251 + -2.8
2,470,251 + -2.2
2,470,251 + +1.1
2,470,258 + -2.9
2,470,259 - -2.9
2,470,259 - -0.9
2,470,259 - -2.7
2,470,259 - -2.0
2,470,269 + -0.2
2,470,302 + -1.2
2,470,365 - +2.6
2,470,371 + +2.5
2,470,371 + +0.7
2,470,379 - -3.7
2,470,379 - -0.7

Or see this region's nucleotide sequence