Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11730

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11720 and BWI76_RS11725 are separated by 285 nucleotidesBWI76_RS11725 and BWI76_RS11730 are separated by 168 nucleotidesBWI76_RS11730 and BWI76_RS11735 are separated by 53 nucleotidesBWI76_RS11735 and BWI76_RS11740 are separated by 12 nucleotides BWI76_RS11720: BWI76_RS11720 - transcriptional regulator, at 2,466,573 to 2,466,911 _RS11720 BWI76_RS11725: BWI76_RS11725 - PTS sugar transporter subunit IIB, at 2,467,197 to 2,467,517 _RS11725 BWI76_RS11730: BWI76_RS11730 - PTS N,N'-diacetylchitobiose transporter subunit IIC, at 2,467,686 to 2,469,044 _RS11730 BWI76_RS11735: BWI76_RS11735 - PTS N,N'-diacetylchitobiose transporter subunit IIA, at 2,469,098 to 2,469,445 _RS11735 BWI76_RS11740: BWI76_RS11740 - transcriptional regulator ChbR, at 2,469,458 to 2,470,297 _RS11740 Position (kb) 2467 2468 2469 2470Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 2466.750 kb on + strand, within BWI76_RS11720at 2466.894 kb on - strandat 2466.894 kb on - strandat 2466.981 kb on - strandat 2466.983 kb on - strandat 2467.031 kb on - strandat 2467.076 kb on + strandat 2467.088 kb on + strandat 2467.090 kb on + strandat 2467.140 kb on + strandat 2467.140 kb on + strandat 2467.148 kb on - strandat 2467.148 kb on - strandat 2467.148 kb on - strandat 2467.148 kb on - strandat 2467.148 kb on - strandat 2467.148 kb on - strandat 2467.174 kb on - strandat 2467.215 kb on + strandat 2467.220 kb on + strandat 2467.220 kb on + strandat 2467.220 kb on + strandat 2467.225 kb on + strandat 2467.228 kb on - strandat 2467.228 kb on - strandat 2467.228 kb on - strandat 2467.235 kb on + strand, within BWI76_RS11725at 2467.236 kb on - strand, within BWI76_RS11725at 2467.238 kb on - strand, within BWI76_RS11725at 2467.243 kb on - strand, within BWI76_RS11725at 2467.243 kb on - strand, within BWI76_RS11725at 2467.246 kb on - strand, within BWI76_RS11725at 2467.282 kb on + strand, within BWI76_RS11725at 2467.298 kb on - strand, within BWI76_RS11725at 2467.319 kb on + strand, within BWI76_RS11725at 2467.327 kb on - strand, within BWI76_RS11725at 2467.390 kb on + strand, within BWI76_RS11725at 2467.440 kb on + strand, within BWI76_RS11725at 2467.445 kb on + strand, within BWI76_RS11725at 2467.448 kb on + strand, within BWI76_RS11725at 2467.572 kb on + strandat 2467.575 kb on + strandat 2467.607 kb on + strandat 2467.636 kb on + strandat 2467.675 kb on + strandat 2467.754 kb on - strandat 2467.765 kb on - strandat 2467.809 kb on - strandat 2467.813 kb on - strandat 2467.884 kb on + strand, within BWI76_RS11730at 2467.884 kb on + strand, within BWI76_RS11730at 2467.900 kb on + strand, within BWI76_RS11730at 2467.900 kb on + strand, within BWI76_RS11730at 2467.903 kb on - strand, within BWI76_RS11730at 2467.910 kb on + strand, within BWI76_RS11730at 2467.910 kb on + strand, within BWI76_RS11730at 2467.918 kb on + strand, within BWI76_RS11730at 2467.926 kb on - strand, within BWI76_RS11730at 2467.926 kb on - strand, within BWI76_RS11730at 2467.927 kb on - strand, within BWI76_RS11730at 2467.933 kb on + strand, within BWI76_RS11730at 2467.937 kb on - strand, within BWI76_RS11730at 2467.940 kb on + strand, within BWI76_RS11730at 2467.940 kb on + strand, within BWI76_RS11730at 2467.941 kb on + strand, within BWI76_RS11730at 2467.948 kb on - strand, within BWI76_RS11730at 2467.949 kb on - strand, within BWI76_RS11730at 2467.949 kb on - strand, within BWI76_RS11730at 2467.960 kb on + strand, within BWI76_RS11730at 2467.960 kb on + strand, within BWI76_RS11730at 2467.960 kb on + strand, within BWI76_RS11730at 2467.960 kb on + strand, within BWI76_RS11730at 2467.960 kb on + strand, within BWI76_RS11730at 2467.988 kb on + strand, within BWI76_RS11730at 2467.993 kb on + strand, within BWI76_RS11730at 2467.993 kb on + strand, within BWI76_RS11730at 2468.001 kb on - strand, within BWI76_RS11730at 2468.001 kb on - strand, within BWI76_RS11730at 2468.001 kb on - strand, within BWI76_RS11730at 2468.004 kb on + strand, within BWI76_RS11730at 2468.012 kb on + strand, within BWI76_RS11730at 2468.012 kb on + strand, within BWI76_RS11730at 2468.012 kb on + strand, within BWI76_RS11730at 2468.012 kb on + strand, within BWI76_RS11730at 2468.025 kb on - strand, within BWI76_RS11730at 2468.025 kb on - strand, within BWI76_RS11730at 2468.045 kb on - strand, within BWI76_RS11730at 2468.045 kb on - strand, within BWI76_RS11730at 2468.063 kb on - strand, within BWI76_RS11730at 2468.073 kb on - strand, within BWI76_RS11730at 2468.080 kb on - strand, within BWI76_RS11730at 2468.090 kb on + strand, within BWI76_RS11730at 2468.106 kb on + strand, within BWI76_RS11730at 2468.152 kb on + strand, within BWI76_RS11730at 2468.152 kb on + strand, within BWI76_RS11730at 2468.160 kb on - strand, within BWI76_RS11730at 2468.160 kb on - strand, within BWI76_RS11730at 2468.265 kb on + strand, within BWI76_RS11730at 2468.331 kb on - strand, within BWI76_RS11730at 2468.366 kb on - strand, within BWI76_RS11730at 2468.379 kb on + strand, within BWI76_RS11730at 2468.436 kb on - strand, within BWI76_RS11730at 2468.462 kb on - strand, within BWI76_RS11730at 2468.636 kb on + strand, within BWI76_RS11730at 2468.672 kb on + strand, within BWI76_RS11730at 2468.755 kb on + strand, within BWI76_RS11730at 2468.808 kb on + strand, within BWI76_RS11730at 2468.816 kb on - strand, within BWI76_RS11730at 2468.890 kb on - strand, within BWI76_RS11730at 2468.989 kb on + strandat 2469.088 kb on - strandat 2469.128 kb on - strandat 2469.162 kb on - strand, within BWI76_RS11735at 2469.185 kb on - strandat 2469.207 kb on - strand, within BWI76_RS11735at 2469.370 kb on + strand, within BWI76_RS11735at 2469.487 kb on + strandat 2469.487 kb on + strandat 2469.495 kb on - strandat 2469.549 kb on + strand, within BWI76_RS11740at 2469.561 kb on + strand, within BWI76_RS11740at 2469.569 kb on - strand, within BWI76_RS11740at 2469.578 kb on - strandat 2469.578 kb on - strand, within BWI76_RS11740at 2469.578 kb on - strand, within BWI76_RS11740at 2469.601 kb on - strand, within BWI76_RS11740at 2469.629 kb on - strand, within BWI76_RS11740at 2469.629 kb on - strand, within BWI76_RS11740at 2469.650 kb on + strand, within BWI76_RS11740at 2469.681 kb on - strand, within BWI76_RS11740at 2469.781 kb on + strand, within BWI76_RS11740at 2469.781 kb on + strand, within BWI76_RS11740at 2469.794 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.808 kb on + strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.816 kb on - strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.939 kb on + strand, within BWI76_RS11740at 2469.941 kb on + strand, within BWI76_RS11740at 2469.947 kb on - strand, within BWI76_RS11740at 2469.947 kb on - strandat 2469.950 kb on - strand, within BWI76_RS11740

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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2,466,750 + BWI76_RS11720 0.52 -0.8
2,466,894 - -3.0
2,466,894 - +0.3
2,466,981 - -0.4
2,466,983 - -0.0
2,467,031 - -0.5
2,467,076 + -0.7
2,467,088 + -2.3
2,467,090 + +0.4
2,467,140 + -0.5
2,467,140 + -4.1
2,467,148 - -4.0
2,467,148 - +1.0
2,467,148 - +2.3
2,467,148 - -1.1
2,467,148 - -3.9
2,467,148 - +0.3
2,467,174 - -2.6
2,467,215 + -2.7
2,467,220 + -0.3
2,467,220 + -2.3
2,467,220 + -1.0
2,467,225 + -0.3
2,467,228 - -0.9
2,467,228 - -0.4
2,467,228 - +1.3
2,467,235 + BWI76_RS11725 0.12 +1.3
2,467,236 - BWI76_RS11725 0.12 +0.7
2,467,238 - BWI76_RS11725 0.13 -2.6
2,467,243 - BWI76_RS11725 0.14 +0.8
2,467,243 - BWI76_RS11725 0.14 +0.5
2,467,246 - BWI76_RS11725 0.15 +1.8
2,467,282 + BWI76_RS11725 0.26 -3.0
2,467,298 - BWI76_RS11725 0.31 -2.2
2,467,319 + BWI76_RS11725 0.38 -2.5
2,467,327 - BWI76_RS11725 0.40 +0.7
2,467,390 + BWI76_RS11725 0.60 -1.6
2,467,440 + BWI76_RS11725 0.76 +0.7
2,467,445 + BWI76_RS11725 0.77 -2.2
2,467,448 + BWI76_RS11725 0.78 +0.3
2,467,572 + -1.9
2,467,575 + -4.3
2,467,607 + +0.7
2,467,636 + +0.0
2,467,675 + +2.3
2,467,754 - +0.7
2,467,765 - -2.0
2,467,809 - -1.6
2,467,813 - -3.4
2,467,884 + BWI76_RS11730 0.15 -1.7
2,467,884 + BWI76_RS11730 0.15 +1.6
2,467,900 + BWI76_RS11730 0.16 -1.2
2,467,900 + BWI76_RS11730 0.16 +0.3
2,467,903 - BWI76_RS11730 0.16 -3.4
2,467,910 + BWI76_RS11730 0.16 +1.6
2,467,910 + BWI76_RS11730 0.16 -1.0
2,467,918 + BWI76_RS11730 0.17 -0.5
2,467,926 - BWI76_RS11730 0.18 +1.3
2,467,926 - BWI76_RS11730 0.18 -1.8
2,467,927 - BWI76_RS11730 0.18 -1.0
2,467,933 + BWI76_RS11730 0.18 +0.3
2,467,937 - BWI76_RS11730 0.18 -4.0
2,467,940 + BWI76_RS11730 0.19 -0.1
2,467,940 + BWI76_RS11730 0.19 +0.3
2,467,941 + BWI76_RS11730 0.19 -0.5
2,467,948 - BWI76_RS11730 0.19 -2.0
2,467,949 - BWI76_RS11730 0.19 -0.3
2,467,949 - BWI76_RS11730 0.19 -3.2
2,467,960 + BWI76_RS11730 0.20 -2.7
2,467,960 + BWI76_RS11730 0.20 -2.3
2,467,960 + BWI76_RS11730 0.20 +0.4
2,467,960 + BWI76_RS11730 0.20 -4.0
2,467,960 + BWI76_RS11730 0.20 -1.0
2,467,988 + BWI76_RS11730 0.22 +1.0
2,467,993 + BWI76_RS11730 0.23 +0.9
2,467,993 + BWI76_RS11730 0.23 -2.2
2,468,001 - BWI76_RS11730 0.23 -1.2
2,468,001 - BWI76_RS11730 0.23 -0.0
2,468,001 - BWI76_RS11730 0.23 -1.2
2,468,004 + BWI76_RS11730 0.23 -4.2
2,468,012 + BWI76_RS11730 0.24 -0.8
2,468,012 + BWI76_RS11730 0.24 -2.9
2,468,012 + BWI76_RS11730 0.24 -1.5
2,468,012 + BWI76_RS11730 0.24 +1.9
2,468,025 - BWI76_RS11730 0.25 +0.3
2,468,025 - BWI76_RS11730 0.25 -2.4
2,468,045 - BWI76_RS11730 0.26 +0.0
2,468,045 - BWI76_RS11730 0.26 -0.5
2,468,063 - BWI76_RS11730 0.28 -0.0
2,468,073 - BWI76_RS11730 0.28 +1.2
2,468,080 - BWI76_RS11730 0.29 -1.9
2,468,090 + BWI76_RS11730 0.30 -1.2
2,468,106 + BWI76_RS11730 0.31 -0.7
2,468,152 + BWI76_RS11730 0.34 -2.5
2,468,152 + BWI76_RS11730 0.34 +0.1
2,468,160 - BWI76_RS11730 0.35 -1.0
2,468,160 - BWI76_RS11730 0.35 +1.3
2,468,265 + BWI76_RS11730 0.43 -0.2
2,468,331 - BWI76_RS11730 0.47 +5.7
2,468,366 - BWI76_RS11730 0.50 -0.2
2,468,379 + BWI76_RS11730 0.51 -2.2
2,468,436 - BWI76_RS11730 0.55 -3.6
2,468,462 - BWI76_RS11730 0.57 -4.2
2,468,636 + BWI76_RS11730 0.70 -0.4
2,468,672 + BWI76_RS11730 0.73 -2.8
2,468,755 + BWI76_RS11730 0.79 -1.0
2,468,808 + BWI76_RS11730 0.83 -3.5
2,468,816 - BWI76_RS11730 0.83 +0.6
2,468,890 - BWI76_RS11730 0.89 -2.0
2,468,989 + -0.4
2,469,088 - -1.8
2,469,128 - -0.5
2,469,162 - BWI76_RS11735 0.18 -2.6
2,469,185 - +2.7
2,469,207 - BWI76_RS11735 0.31 -2.1
2,469,370 + BWI76_RS11735 0.78 -1.5
2,469,487 + +0.7
2,469,487 + -4.1
2,469,495 - +0.0
2,469,549 + BWI76_RS11740 0.11 -0.4
2,469,561 + BWI76_RS11740 0.12 +1.3
2,469,569 - BWI76_RS11740 0.13 -3.7
2,469,578 - +0.7
2,469,578 - BWI76_RS11740 0.14 -1.3
2,469,578 - BWI76_RS11740 0.14 +0.7
2,469,601 - BWI76_RS11740 0.17 +0.4
2,469,629 - BWI76_RS11740 0.20 -2.5
2,469,629 - BWI76_RS11740 0.20 -2.5
2,469,650 + BWI76_RS11740 0.23 -1.8
2,469,681 - BWI76_RS11740 0.27 +3.1
2,469,781 + BWI76_RS11740 0.38 -1.5
2,469,781 + BWI76_RS11740 0.38 +0.6
2,469,794 + BWI76_RS11740 0.40 -1.2
2,469,808 + BWI76_RS11740 0.42 -2.0
2,469,808 + BWI76_RS11740 0.42 -0.9
2,469,808 + BWI76_RS11740 0.42 +2.3
2,469,808 + BWI76_RS11740 0.42 -1.4
2,469,808 + BWI76_RS11740 0.42 +0.7
2,469,808 + BWI76_RS11740 0.42 -0.7
2,469,808 + BWI76_RS11740 0.42 +1.3
2,469,808 + BWI76_RS11740 0.42 -1.1
2,469,808 + BWI76_RS11740 0.42 -0.7
2,469,808 + BWI76_RS11740 0.42 +0.3
2,469,816 - BWI76_RS11740 0.43 -0.3
2,469,816 - BWI76_RS11740 0.43 -0.0
2,469,816 - BWI76_RS11740 0.43 +1.6
2,469,816 - BWI76_RS11740 0.43 -0.7
2,469,816 - BWI76_RS11740 0.43 -0.5
2,469,939 + BWI76_RS11740 0.57 -1.4
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,939 + BWI76_RS11740 0.57 -1.3
2,469,939 + BWI76_RS11740 0.57 -1.4
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,939 + BWI76_RS11740 0.57 -0.3
2,469,939 + BWI76_RS11740 0.57 +0.7
2,469,939 + BWI76_RS11740 0.57 -0.9
2,469,939 + BWI76_RS11740 0.57 -0.9
2,469,939 + BWI76_RS11740 0.57 -2.6
2,469,939 + BWI76_RS11740 0.57 -3.0
2,469,939 + BWI76_RS11740 0.57 -1.9
2,469,939 + BWI76_RS11740 0.57 -1.0
2,469,939 + BWI76_RS11740 0.57 +1.3
2,469,941 + BWI76_RS11740 0.57 +0.7
2,469,947 - BWI76_RS11740 0.58 +0.9
2,469,947 - +2.3
2,469,950 - BWI76_RS11740 0.59 -2.0

Or see this region's nucleotide sequence