Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11355 and BWI76_RS11360 are separated by 278 nucleotides BWI76_RS11360 and BWI76_RS11365 are separated by 36 nucleotides BWI76_RS11365 and BWI76_RS11370 are separated by 0 nucleotides
BWI76_RS11355: BWI76_RS11355 - phosphodiesterase, at 2,392,835 to 2,394,022
_RS11355
BWI76_RS11360: BWI76_RS11360 - L-asparaginase, at 2,394,301 to 2,395,344
_RS11360
BWI76_RS11365: BWI76_RS11365 - iron ABC transporter, at 2,395,381 to 2,396,148
_RS11365
BWI76_RS11370: BWI76_RS11370 - iron-dicitrate transporter subunit FecD, at 2,396,149 to 2,397,102
_RS11370
Position (kb)
2394
2395
2396 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2393.352 kb on - strand, within BWI76_RS11355 at 2393.354 kb on + strand, within BWI76_RS11355 at 2393.362 kb on + strand, within BWI76_RS11355 at 2393.362 kb on + strand, within BWI76_RS11355 at 2393.535 kb on + strand, within BWI76_RS11355 at 2393.543 kb on - strand, within BWI76_RS11355 at 2393.679 kb on - strand, within BWI76_RS11355 at 2393.776 kb on + strand, within BWI76_RS11355 at 2393.898 kb on + strand, within BWI76_RS11355 at 2393.898 kb on + strand, within BWI76_RS11355 at 2393.932 kb on - strand at 2393.953 kb on - strand at 2394.058 kb on - strand at 2394.092 kb on - strand at 2394.128 kb on - strand at 2394.143 kb on + strand at 2394.166 kb on + strand at 2394.477 kb on + strand, within BWI76_RS11360 at 2394.477 kb on + strand, within BWI76_RS11360 at 2394.485 kb on - strand, within BWI76_RS11360 at 2394.498 kb on + strand, within BWI76_RS11360 at 2394.598 kb on - strand, within BWI76_RS11360 at 2395.329 kb on + strand at 2395.541 kb on + strand, within BWI76_RS11365 at 2395.551 kb on + strand, within BWI76_RS11365 at 2395.784 kb on - strand, within BWI76_RS11365 at 2396.128 kb on - strand at 2396.177 kb on + strand at 2396.210 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 2,393,352 - BWI76_RS11355 0.44 +4.5 2,393,354 + BWI76_RS11355 0.44 -3.0 2,393,362 + BWI76_RS11355 0.44 -1.3 2,393,362 + BWI76_RS11355 0.44 -1.0 2,393,535 + BWI76_RS11355 0.59 -0.6 2,393,543 - BWI76_RS11355 0.60 -1.3 2,393,679 - BWI76_RS11355 0.71 -3.8 2,393,776 + BWI76_RS11355 0.79 -1.1 2,393,898 + BWI76_RS11355 0.89 +0.3 2,393,898 + BWI76_RS11355 0.89 +0.5 2,393,932 - +2.4 2,393,953 - -3.4 2,394,058 - -0.0 2,394,092 - -0.7 2,394,128 - +2.2 2,394,143 + -1.6 2,394,166 + -0.5 2,394,477 + BWI76_RS11360 0.17 -3.5 2,394,477 + BWI76_RS11360 0.17 -0.2 2,394,485 - BWI76_RS11360 0.18 -2.5 2,394,498 + BWI76_RS11360 0.19 -0.2 2,394,598 - BWI76_RS11360 0.28 -3.5 2,395,329 + -3.1 2,395,541 + BWI76_RS11365 0.21 +0.9 2,395,551 + BWI76_RS11365 0.22 -4.7 2,395,784 - BWI76_RS11365 0.52 -0.2 2,396,128 - -1.6 2,396,177 + -1.2 2,396,210 + -3.1
Or see this region's nucleotide sequence