Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08945

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08935 and BWI76_RS08940 are separated by 68 nucleotidesBWI76_RS08940 and BWI76_RS08945 are separated by 45 nucleotidesBWI76_RS08945 and BWI76_RS08950 are separated by 296 nucleotides BWI76_RS08935: BWI76_RS08935 - hypothetical protein, at 1,882,300 to 1,882,566 _RS08935 BWI76_RS08940: BWI76_RS08940 - PKHD-type hydroxylase, at 1,882,635 to 1,883,312 _RS08940 BWI76_RS08945: BWI76_RS08945 - catecholate siderophore receptor Fiu, at 1,883,358 to 1,885,646 _RS08945 BWI76_RS08950: BWI76_RS08950 - Asp/Glu/hydantoin racemase, at 1,885,943 to 1,886,557 _RS08950 Position (kb) 1883 1884 1885 1886Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1882.571 kb on - strandat 1882.576 kb on + strandat 1882.589 kb on + strandat 1882.591 kb on + strandat 1882.661 kb on + strandat 1882.839 kb on + strand, within BWI76_RS08940at 1882.898 kb on + strand, within BWI76_RS08940at 1883.066 kb on - strand, within BWI76_RS08940at 1883.139 kb on + strand, within BWI76_RS08940at 1883.152 kb on + strand, within BWI76_RS08940at 1883.177 kb on - strand, within BWI76_RS08940at 1883.457 kb on - strandat 1883.539 kb on + strandat 1883.685 kb on + strand, within BWI76_RS08945at 1883.730 kb on + strand, within BWI76_RS08945at 1883.954 kb on + strand, within BWI76_RS08945at 1884.583 kb on + strand, within BWI76_RS08945at 1884.664 kb on + strand, within BWI76_RS08945at 1885.862 kb on + strandat 1886.031 kb on - strand, within BWI76_RS08950at 1886.102 kb on - strand, within BWI76_RS08950at 1886.131 kb on - strand, within BWI76_RS08950at 1886.365 kb on + strand, within BWI76_RS08950at 1886.439 kb on + strand, within BWI76_RS08950

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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1,882,571 - -0.7
1,882,576 + +2.6
1,882,589 + -1.9
1,882,591 + -2.1
1,882,661 + +0.1
1,882,839 + BWI76_RS08940 0.30 -2.1
1,882,898 + BWI76_RS08940 0.39 +0.6
1,883,066 - BWI76_RS08940 0.64 -1.3
1,883,139 + BWI76_RS08940 0.74 -0.6
1,883,152 + BWI76_RS08940 0.76 +2.4
1,883,177 - BWI76_RS08940 0.80 -0.7
1,883,457 - +0.4
1,883,539 + -0.5
1,883,685 + BWI76_RS08945 0.14 -3.5
1,883,730 + BWI76_RS08945 0.16 +0.4
1,883,954 + BWI76_RS08945 0.26 +0.5
1,884,583 + BWI76_RS08945 0.54 -0.6
1,884,664 + BWI76_RS08945 0.57 -0.8
1,885,862 + -0.3
1,886,031 - BWI76_RS08950 0.14 -2.4
1,886,102 - BWI76_RS08950 0.26 +0.6
1,886,131 - BWI76_RS08950 0.31 -2.3
1,886,365 + BWI76_RS08950 0.69 -0.0
1,886,439 + BWI76_RS08950 0.81 -0.3

Or see this region's nucleotide sequence