Experiment: K. M5a1 KLEB26 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07285 and BWI76_RS07290 are separated by 211 nucleotides BWI76_RS07290 and BWI76_RS07295 overlap by 4 nucleotides
BWI76_RS07285: BWI76_RS07285 - LysR family transcriptional regulator, at 1,532,658 to 1,533,587
_RS07285
BWI76_RS07290: BWI76_RS07290 - PTS beta-glucoside transporter subunit EIIBCA, at 1,533,799 to 1,535,679
_RS07290
BWI76_RS07295: BWI76_RS07295 - 6-phospho-beta-glucosidase, at 1,535,676 to 1,537,100
_RS07295
Position (kb)
1533
1534
1535
1536 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1532.819 kb on - strand, within BWI76_RS07285 at 1532.945 kb on + strand, within BWI76_RS07285 at 1532.954 kb on - strand, within BWI76_RS07285 at 1533.209 kb on + strand, within BWI76_RS07285 at 1533.407 kb on - strand, within BWI76_RS07285 at 1533.439 kb on - strand, within BWI76_RS07285 at 1533.521 kb on + strand at 1533.550 kb on - strand at 1533.550 kb on - strand at 1533.562 kb on + strand at 1533.923 kb on - strand at 1533.954 kb on - strand at 1534.011 kb on + strand, within BWI76_RS07290 at 1534.124 kb on + strand, within BWI76_RS07290 at 1534.132 kb on - strand, within BWI76_RS07290 at 1534.156 kb on + strand, within BWI76_RS07290 at 1534.289 kb on - strand, within BWI76_RS07290 at 1534.670 kb on + strand, within BWI76_RS07290 at 1534.934 kb on - strand, within BWI76_RS07290 at 1535.111 kb on + strand, within BWI76_RS07290 at 1535.111 kb on + strand, within BWI76_RS07290 at 1535.111 kb on + strand, within BWI76_RS07290 at 1535.119 kb on - strand, within BWI76_RS07290 at 1535.119 kb on - strand, within BWI76_RS07290 at 1535.119 kb on - strand, within BWI76_RS07290 at 1535.343 kb on + strand, within BWI76_RS07290 at 1535.392 kb on - strand, within BWI76_RS07290 at 1535.408 kb on + strand, within BWI76_RS07290 at 1535.416 kb on - strand, within BWI76_RS07290 at 1535.449 kb on - strand, within BWI76_RS07290 at 1535.552 kb on - strand at 1535.590 kb on + strand at 1535.600 kb on + strand at 1535.710 kb on + strand at 1535.738 kb on - strand at 1535.752 kb on - strand at 1535.864 kb on - strand, within BWI76_RS07295 at 1535.888 kb on + strand, within BWI76_RS07295 at 1536.067 kb on - strand, within BWI76_RS07295 at 1536.102 kb on - strand, within BWI76_RS07295 at 1536.109 kb on + strand, within BWI76_RS07295 at 1536.284 kb on + strand, within BWI76_RS07295 at 1536.373 kb on - strand, within BWI76_RS07295 at 1536.423 kb on - strand, within BWI76_RS07295 at 1536.664 kb on - strand, within BWI76_RS07295
Per-strain Table
Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1 remove 1,532,819 - BWI76_RS07285 0.17 -0.5 1,532,945 + BWI76_RS07285 0.31 +1.1 1,532,954 - BWI76_RS07285 0.32 -1.1 1,533,209 + BWI76_RS07285 0.59 +1.4 1,533,407 - BWI76_RS07285 0.81 -0.6 1,533,439 - BWI76_RS07285 0.84 -1.1 1,533,521 + -1.7 1,533,550 - +1.7 1,533,550 - -1.4 1,533,562 + +0.3 1,533,923 - -0.8 1,533,954 - -4.3 1,534,011 + BWI76_RS07290 0.11 -2.3 1,534,124 + BWI76_RS07290 0.17 -0.0 1,534,132 - BWI76_RS07290 0.18 -3.2 1,534,156 + BWI76_RS07290 0.19 +0.2 1,534,289 - BWI76_RS07290 0.26 -0.0 1,534,670 + BWI76_RS07290 0.46 +0.5 1,534,934 - BWI76_RS07290 0.60 -0.1 1,535,111 + BWI76_RS07290 0.70 -2.1 1,535,111 + BWI76_RS07290 0.70 -1.2 1,535,111 + BWI76_RS07290 0.70 -0.0 1,535,119 - BWI76_RS07290 0.70 -3.8 1,535,119 - BWI76_RS07290 0.70 -2.2 1,535,119 - BWI76_RS07290 0.70 -3.2 1,535,343 + BWI76_RS07290 0.82 -0.2 1,535,392 - BWI76_RS07290 0.85 -3.2 1,535,408 + BWI76_RS07290 0.86 -1.3 1,535,416 - BWI76_RS07290 0.86 +0.6 1,535,449 - BWI76_RS07290 0.88 -1.2 1,535,552 - +1.6 1,535,590 + -1.9 1,535,600 + -1.0 1,535,710 + -0.8 1,535,738 - +0.2 1,535,752 - +0.6 1,535,864 - BWI76_RS07295 0.13 -2.9 1,535,888 + BWI76_RS07295 0.15 -3.3 1,536,067 - BWI76_RS07295 0.27 -1.0 1,536,102 - BWI76_RS07295 0.30 -2.0 1,536,109 + BWI76_RS07295 0.30 +0.9 1,536,284 + BWI76_RS07295 0.43 +4.3 1,536,373 - BWI76_RS07295 0.49 +1.4 1,536,423 - BWI76_RS07295 0.52 -2.3 1,536,664 - BWI76_RS07295 0.69 -2.9
Or see this region's nucleotide sequence