Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05370

Experiment: K. M5a1 KLEB26 MOI 0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS05365 and BWI76_RS05370 are separated by 188 nucleotidesBWI76_RS05370 and BWI76_RS05375 are separated by 105 nucleotidesBWI76_RS05375 and BWI76_RS05380 are separated by 53 nucleotides BWI76_RS05365: BWI76_RS05365 - D-methionine ABC transporter, ATP-binding protein, at 1,128,650 to 1,129,681 _RS05365 BWI76_RS05370: BWI76_RS05370 - D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase, at 1,129,870 to 1,130,436 _RS05370 BWI76_RS05375: BWI76_RS05375 - hypothetical protein, at 1,130,542 to 1,130,747 _RS05375 BWI76_RS05380: BWI76_RS05380 - 16S ribosomal RNA, at 1,130,801 to 1,132,354 _RS05380 Position (kb) 1129 1130 1131Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1128.898 kb on - strand, within BWI76_RS05365at 1129.073 kb on - strand, within BWI76_RS05365at 1129.128 kb on + strand, within BWI76_RS05365at 1129.283 kb on - strand, within BWI76_RS05365at 1129.296 kb on - strand, within BWI76_RS05365at 1129.413 kb on - strand, within BWI76_RS05365at 1129.492 kb on + strand, within BWI76_RS05365at 1129.492 kb on + strand, within BWI76_RS05365at 1129.492 kb on + strand, within BWI76_RS05365at 1129.497 kb on + strand, within BWI76_RS05365at 1129.500 kb on - strand, within BWI76_RS05365at 1129.502 kb on + strand, within BWI76_RS05365at 1129.502 kb on + strand, within BWI76_RS05365at 1129.510 kb on - strand, within BWI76_RS05365at 1129.525 kb on + strand, within BWI76_RS05365at 1129.525 kb on + strand, within BWI76_RS05365at 1129.525 kb on + strand, within BWI76_RS05365at 1129.533 kb on - strand, within BWI76_RS05365at 1129.555 kb on - strand, within BWI76_RS05365

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Per-strain Table

Position Strand Gene LocusTag Fraction K. M5a1 KLEB26 MOI 0.1
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1,128,898 - BWI76_RS05365 0.24 -0.9
1,129,073 - BWI76_RS05365 0.41 +1.0
1,129,128 + BWI76_RS05365 0.46 +1.5
1,129,283 - BWI76_RS05365 0.61 +0.8
1,129,296 - BWI76_RS05365 0.63 +3.5
1,129,413 - BWI76_RS05365 0.74 -0.3
1,129,492 + BWI76_RS05365 0.82 +0.4
1,129,492 + BWI76_RS05365 0.82 +3.2
1,129,492 + BWI76_RS05365 0.82 +3.1
1,129,497 + BWI76_RS05365 0.82 -2.0
1,129,500 - BWI76_RS05365 0.82 +0.0
1,129,502 + BWI76_RS05365 0.83 +0.7
1,129,502 + BWI76_RS05365 0.83 +2.3
1,129,510 - BWI76_RS05365 0.83 -0.2
1,129,525 + BWI76_RS05365 0.85 -1.4
1,129,525 + BWI76_RS05365 0.85 +1.9
1,129,525 + BWI76_RS05365 0.85 +0.4
1,129,533 - BWI76_RS05365 0.86 -2.3
1,129,555 - BWI76_RS05365 0.88 +0.6

Or see this region's nucleotide sequence