Experiment: B3 MOi 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22440 and BWI76_RS22445 are separated by 124 nucleotides BWI76_RS22445 and BWI76_RS22450 are separated by 45 nucleotides BWI76_RS22450 and BWI76_RS22455 are separated by 215 nucleotides
BWI76_RS22440: BWI76_RS22440 - iron ABC transporter permease, at 4,678,733 to 4,679,587
_RS22440
BWI76_RS22445: BWI76_RS22445 - hypothetical protein, at 4,679,712 to 4,680,086
_RS22445
BWI76_RS22450: BWI76_RS22450 - selenoprotein W-related protein, at 4,680,132 to 4,680,416
_RS22450
BWI76_RS22455: BWI76_RS22455 - TonB-dependent receptor, at 4,680,632 to 4,683,001
_RS22455
Position (kb)
4680
4681 Strain fitness (log2 ratio)
-2
-1
0
1 at 4679.211 kb on + strand, within BWI76_RS22440 at 4679.272 kb on + strand, within BWI76_RS22440 at 4679.366 kb on - strand, within BWI76_RS22440 at 4679.425 kb on - strand, within BWI76_RS22440 at 4679.489 kb on + strand, within BWI76_RS22440 at 4679.642 kb on - strand at 4679.680 kb on - strand at 4680.060 kb on - strand at 4680.111 kb on - strand at 4680.206 kb on - strand, within BWI76_RS22450 at 4680.382 kb on + strand, within BWI76_RS22450 at 4680.572 kb on - strand at 4680.580 kb on - strand at 4680.580 kb on - strand at 4680.582 kb on - strand at 4680.582 kb on - strand at 4680.632 kb on + strand at 4680.642 kb on - strand at 4680.642 kb on - strand at 4680.725 kb on + strand at 4680.771 kb on + strand at 4680.881 kb on + strand, within BWI76_RS22455 at 4681.226 kb on - strand, within BWI76_RS22455
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 1 remove 4,679,211 + BWI76_RS22440 0.56 +1.3 4,679,272 + BWI76_RS22440 0.63 +0.9 4,679,366 - BWI76_RS22440 0.74 -0.5 4,679,425 - BWI76_RS22440 0.81 -0.2 4,679,489 + BWI76_RS22440 0.88 -0.0 4,679,642 - -0.3 4,679,680 - +1.2 4,680,060 - +0.3 4,680,111 - +0.1 4,680,206 - BWI76_RS22450 0.26 -0.4 4,680,382 + BWI76_RS22450 0.88 -1.8 4,680,572 - -0.2 4,680,580 - -2.1 4,680,580 - -0.2 4,680,582 - -0.2 4,680,582 - +1.2 4,680,632 + +1.4 4,680,642 - +0.6 4,680,642 - -1.1 4,680,725 + -0.1 4,680,771 + -0.1 4,680,881 + BWI76_RS22455 0.11 -0.2 4,681,226 - BWI76_RS22455 0.25 +1.4
Or see this region's nucleotide sequence