Experiment: B3 MOi 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20605 and BWI76_RS20610 are separated by 122 nucleotides BWI76_RS20610 and BWI76_RS20615 are separated by 89 nucleotides
BWI76_RS20605: BWI76_RS20605 - purine-nucleoside phosphorylase, at 4,311,784 to 4,312,617
_RS20605
BWI76_RS20610: BWI76_RS20610 - LysR family transcriptional regulator, at 4,312,740 to 4,313,666
_RS20610
BWI76_RS20615: BWI76_RS20615 - sodium symporter, at 4,313,756 to 4,314,754
_RS20615
Position (kb) 4312
4313
4314 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4311.811 kb on + strand at 4311.927 kb on + strand, within BWI76_RS20605 at 4312.190 kb on - strand, within BWI76_RS20605 at 4312.320 kb on + strand, within BWI76_RS20605 at 4312.378 kb on + strand, within BWI76_RS20605 at 4312.577 kb on + strand at 4312.621 kb on - strand at 4313.394 kb on - strand, within BWI76_RS20610 at 4313.416 kb on + strand, within BWI76_RS20610 at 4313.476 kb on + strand, within BWI76_RS20610 at 4313.493 kb on - strand, within BWI76_RS20610 at 4313.530 kb on - strand, within BWI76_RS20610 at 4313.582 kb on + strand at 4313.590 kb on - strand at 4313.602 kb on - strand at 4313.924 kb on - strand, within BWI76_RS20615 at 4314.152 kb on + strand, within BWI76_RS20615 at 4314.227 kb on + strand, within BWI76_RS20615 at 4314.234 kb on + strand, within BWI76_RS20615 at 4314.242 kb on - strand, within BWI76_RS20615 at 4314.604 kb on + strand, within BWI76_RS20615
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 1 remove 4,311,811 + +0.6 4,311,927 + BWI76_RS20605 0.17 -0.3 4,312,190 - BWI76_RS20605 0.49 -0.4 4,312,320 + BWI76_RS20605 0.64 -2.2 4,312,378 + BWI76_RS20605 0.71 -0.1 4,312,577 + -0.1 4,312,621 - +1.9 4,313,394 - BWI76_RS20610 0.71 +0.7 4,313,416 + BWI76_RS20610 0.73 +0.6 4,313,476 + BWI76_RS20610 0.79 +1.7 4,313,493 - BWI76_RS20610 0.81 +0.4 4,313,530 - BWI76_RS20610 0.85 +1.1 4,313,582 + +0.8 4,313,590 - +1.2 4,313,602 - +0.5 4,313,924 - BWI76_RS20615 0.17 +0.7 4,314,152 + BWI76_RS20615 0.40 +0.1 4,314,227 + BWI76_RS20615 0.47 +0.8 4,314,234 + BWI76_RS20615 0.48 -0.3 4,314,242 - BWI76_RS20615 0.49 +0.3 4,314,604 + BWI76_RS20615 0.85 +0.1
Or see this region's nucleotide sequence