Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13195

Experiment: B3 MOi 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13185 and BWI76_RS13190 overlap by 1 nucleotidesBWI76_RS13190 and BWI76_RS13195 are separated by 177 nucleotidesBWI76_RS13195 and BWI76_RS13200 overlap by 26 nucleotidesBWI76_RS13200 and BWI76_RS13205 are separated by 202 nucleotides BWI76_RS13185: BWI76_RS13185 - MFS transporter, at 2,751,487 to 2,753,139 _RS13185 BWI76_RS13190: BWI76_RS13190 - MarR family transcriptional regulator, at 2,753,139 to 2,753,570 _RS13190 BWI76_RS13195: BWI76_RS13195 - glutamate dehydrogenase, at 2,753,748 to 2,755,022 _RS13195 BWI76_RS13200: BWI76_RS13200 - hypothetical protein, at 2,754,997 to 2,755,230 _RS13200 BWI76_RS13205: BWI76_RS13205 - hypothetical protein, at 2,755,433 to 2,756,224 _RS13205 Position (kb) 2753 2754 2755 2756Strain fitness (log2 ratio) -2 -1 0 1 2at 2753.635 kb on - strandat 2753.659 kb on - strandat 2753.974 kb on + strand, within BWI76_RS13195at 2754.215 kb on - strand, within BWI76_RS13195at 2754.261 kb on - strand, within BWI76_RS13195at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.074 kb on + strand, within BWI76_RS13200at 2755.075 kb on + strand, within BWI76_RS13200at 2755.082 kb on - strand, within BWI76_RS13200at 2755.082 kb on - strand, within BWI76_RS13200at 2755.407 kb on + strandat 2755.662 kb on + strand, within BWI76_RS13205at 2755.757 kb on + strand, within BWI76_RS13205at 2755.899 kb on - strand, within BWI76_RS13205at 2755.915 kb on - strand, within BWI76_RS13205at 2755.951 kb on + strand, within BWI76_RS13205

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Per-strain Table

Position Strand Gene LocusTag Fraction B3 MOi 1
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2,753,635 - +1.3
2,753,659 - -0.6
2,753,974 + BWI76_RS13195 0.18 -0.7
2,754,215 - BWI76_RS13195 0.37 -1.9
2,754,261 - BWI76_RS13195 0.40 -0.1
2,755,074 + BWI76_RS13200 0.33 +0.2
2,755,074 + BWI76_RS13200 0.33 +0.3
2,755,074 + BWI76_RS13200 0.33 -0.3
2,755,074 + BWI76_RS13200 0.33 +0.1
2,755,074 + BWI76_RS13200 0.33 +0.4
2,755,074 + BWI76_RS13200 0.33 -1.2
2,755,074 + BWI76_RS13200 0.33 +0.7
2,755,075 + BWI76_RS13200 0.33 -1.7
2,755,082 - BWI76_RS13200 0.36 +1.9
2,755,082 - BWI76_RS13200 0.36 +0.4
2,755,407 + +1.2
2,755,662 + BWI76_RS13205 0.29 +1.2
2,755,757 + BWI76_RS13205 0.41 -0.1
2,755,899 - BWI76_RS13205 0.59 +0.2
2,755,915 - BWI76_RS13205 0.61 +0.4
2,755,951 + BWI76_RS13205 0.65 +0.2

Or see this region's nucleotide sequence