Experiment: B3 MOi 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06660 and BWI76_RS06665 are separated by 87 nucleotides BWI76_RS06665 and BWI76_RS06670 are separated by 92 nucleotides BWI76_RS06670 and BWI76_RS06675 are separated by 46 nucleotides
BWI76_RS06660: BWI76_RS06660 - GntR family transcriptional regulator with, at 1,396,628 to 1,398,055
_RS06660
BWI76_RS06665: BWI76_RS06665 - membrane protein, at 1,398,143 to 1,398,757
_RS06665
BWI76_RS06670: BWI76_RS06670 - hypothetical protein, at 1,398,850 to 1,399,203
_RS06670
BWI76_RS06675: BWI76_RS06675 - nickel/cobalt efflux protein RcnA, at 1,399,250 to 1,400,083
_RS06675
Position (kb)
1398
1399 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1397.398 kb on + strand, within BWI76_RS06660 at 1397.434 kb on - strand, within BWI76_RS06660 at 1397.626 kb on - strand, within BWI76_RS06660 at 1397.718 kb on - strand, within BWI76_RS06660 at 1397.818 kb on - strand, within BWI76_RS06660 at 1397.937 kb on + strand at 1398.136 kb on - strand at 1398.187 kb on - strand at 1398.298 kb on + strand, within BWI76_RS06665 at 1398.472 kb on + strand, within BWI76_RS06665 at 1398.775 kb on - strand at 1398.898 kb on + strand, within BWI76_RS06670 at 1398.964 kb on + strand, within BWI76_RS06670 at 1398.972 kb on - strand, within BWI76_RS06670 at 1399.025 kb on + strand, within BWI76_RS06670 at 1399.045 kb on + strand, within BWI76_RS06670 at 1399.058 kb on + strand, within BWI76_RS06670 at 1399.070 kb on + strand, within BWI76_RS06670 at 1399.078 kb on - strand, within BWI76_RS06670 at 1399.178 kb on + strand at 1399.186 kb on - strand at 1399.301 kb on - strand at 1399.444 kb on + strand, within BWI76_RS06675 at 1399.452 kb on - strand, within BWI76_RS06675 at 1399.489 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.554 kb on + strand, within BWI76_RS06675 at 1399.562 kb on - strand, within BWI76_RS06675 at 1399.640 kb on + strand, within BWI76_RS06675
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 1 remove 1,397,398 + BWI76_RS06660 0.54 -0.3 1,397,434 - BWI76_RS06660 0.56 +0.2 1,397,626 - BWI76_RS06660 0.70 -0.0 1,397,718 - BWI76_RS06660 0.76 -0.1 1,397,818 - BWI76_RS06660 0.83 +0.2 1,397,937 + -0.4 1,398,136 - -0.5 1,398,187 - +0.1 1,398,298 + BWI76_RS06665 0.25 -0.9 1,398,472 + BWI76_RS06665 0.53 +0.3 1,398,775 - -0.1 1,398,898 + BWI76_RS06670 0.14 -0.3 1,398,964 + BWI76_RS06670 0.32 +0.0 1,398,972 - BWI76_RS06670 0.34 +0.4 1,399,025 + BWI76_RS06670 0.49 -2.3 1,399,045 + BWI76_RS06670 0.55 -0.3 1,399,058 + BWI76_RS06670 0.59 +0.8 1,399,070 + BWI76_RS06670 0.62 +0.1 1,399,078 - BWI76_RS06670 0.64 +0.2 1,399,178 + -0.1 1,399,186 - -0.2 1,399,301 - -0.2 1,399,444 + BWI76_RS06675 0.23 +0.5 1,399,452 - BWI76_RS06675 0.24 +1.9 1,399,489 + BWI76_RS06675 0.29 +0.6 1,399,554 + BWI76_RS06675 0.36 -0.9 1,399,554 + BWI76_RS06675 0.36 -0.1 1,399,554 + BWI76_RS06675 0.36 -0.3 1,399,562 - BWI76_RS06675 0.37 +1.7 1,399,640 + BWI76_RS06675 0.47 -0.4
Or see this region's nucleotide sequence