Experiment: B3 MOi 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06320 and BWI76_RS06325 are separated by 64 nucleotides BWI76_RS06325 and BWI76_RS06330 are separated by 148 nucleotides BWI76_RS06330 and BWI76_RS06335 are separated by 45 nucleotides
BWI76_RS06320: BWI76_RS06320 - Xaa-Pro aminopeptidase, at 1,330,591 to 1,331,982
_RS06320
BWI76_RS06325: BWI76_RS06325 - hypothetical protein, at 1,332,047 to 1,332,424
_RS06325
BWI76_RS06330: BWI76_RS06330 - DNA-binding transcriptional regulator, at 1,332,573 to 1,333,262
_RS06330
BWI76_RS06335: BWI76_RS06335 - nucleoside-specific channel-forming protein Tsx, at 1,333,308 to 1,334,192
_RS06335
Position (kb)
1332
1333 Strain fitness (log2 ratio)
-1
0
1 at 1331.238 kb on + strand, within BWI76_RS06320 at 1331.246 kb on + strand, within BWI76_RS06320 at 1331.734 kb on + strand, within BWI76_RS06320 at 1331.830 kb on - strand, within BWI76_RS06320 at 1331.994 kb on + strand at 1332.002 kb on - strand at 1332.004 kb on + strand at 1332.004 kb on + strand at 1332.012 kb on - strand at 1332.012 kb on - strand at 1332.064 kb on - strand at 1332.064 kb on - strand at 1332.083 kb on + strand at 1332.223 kb on + strand, within BWI76_RS06325 at 1332.231 kb on + strand, within BWI76_RS06325 at 1332.231 kb on - strand, within BWI76_RS06325 at 1332.762 kb on + strand, within BWI76_RS06330 at 1332.953 kb on + strand, within BWI76_RS06330 at 1333.131 kb on - strand, within BWI76_RS06330 at 1333.395 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 1 remove 1,331,238 + BWI76_RS06320 0.46 -0.4 1,331,246 + BWI76_RS06320 0.47 +0.9 1,331,734 + BWI76_RS06320 0.82 -0.2 1,331,830 - BWI76_RS06320 0.89 +0.2 1,331,994 + +0.1 1,332,002 - +0.2 1,332,004 + +0.1 1,332,004 + +0.0 1,332,012 - -0.1 1,332,012 - +0.4 1,332,064 - -0.5 1,332,064 - +0.3 1,332,083 + -0.5 1,332,223 + BWI76_RS06325 0.47 -0.5 1,332,231 + BWI76_RS06325 0.49 -1.0 1,332,231 - BWI76_RS06325 0.49 -1.0 1,332,762 + BWI76_RS06330 0.27 +0.6 1,332,953 + BWI76_RS06330 0.55 +0.6 1,333,131 - BWI76_RS06330 0.81 +0.3 1,333,395 + +0.4
Or see this region's nucleotide sequence