Experiment: B3 MOi 10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09045 and BWI76_RS09050 are separated by 15 nucleotides BWI76_RS09050 and BWI76_RS09055 are separated by 298 nucleotides
BWI76_RS09045: BWI76_RS09045 - alpha-glucosidase, at 1,906,130 to 1,908,493
_RS09045
BWI76_RS09050: BWI76_RS09050 - MFS transporter, at 1,908,509 to 1,909,810
_RS09050
BWI76_RS09055: BWI76_RS09055 - LacI family transcriptional regulator, at 1,910,109 to 1,911,182
_RS09055
Position (kb)
1908
1909
1910 Strain fitness (log2 ratio)
-1
0
1
2 at 1907.574 kb on + strand, within BWI76_RS09045 at 1907.857 kb on - strand, within BWI76_RS09045 at 1907.929 kb on + strand, within BWI76_RS09045 at 1908.075 kb on - strand, within BWI76_RS09045 at 1908.227 kb on + strand, within BWI76_RS09045 at 1908.276 kb on - strand at 1908.424 kb on + strand at 1908.471 kb on - strand at 1908.550 kb on + strand at 1908.899 kb on + strand, within BWI76_RS09050 at 1909.031 kb on + strand, within BWI76_RS09050 at 1909.641 kb on + strand, within BWI76_RS09050 at 1909.735 kb on + strand at 1910.023 kb on + strand at 1910.023 kb on + strand at 1910.091 kb on + strand at 1910.159 kb on + strand at 1910.223 kb on + strand, within BWI76_RS09055 at 1910.231 kb on - strand, within BWI76_RS09055 at 1910.397 kb on - strand, within BWI76_RS09055 at 1910.418 kb on - strand, within BWI76_RS09055 at 1910.463 kb on + strand, within BWI76_RS09055 at 1910.725 kb on - strand, within BWI76_RS09055
Per-strain Table
Position Strand Gene LocusTag Fraction B3 MOi 10 remove 1,907,574 + BWI76_RS09045 0.61 +0.7 1,907,857 - BWI76_RS09045 0.73 +1.1 1,907,929 + BWI76_RS09045 0.76 +0.7 1,908,075 - BWI76_RS09045 0.82 +0.8 1,908,227 + BWI76_RS09045 0.89 -0.2 1,908,276 - +0.8 1,908,424 + +0.7 1,908,471 - +0.2 1,908,550 + -0.7 1,908,899 + BWI76_RS09050 0.30 -1.6 1,909,031 + BWI76_RS09050 0.40 -0.4 1,909,641 + BWI76_RS09050 0.87 -0.4 1,909,735 + +0.1 1,910,023 + +0.0 1,910,023 + -0.3 1,910,091 + -0.2 1,910,159 + +1.2 1,910,223 + BWI76_RS09055 0.11 +0.3 1,910,231 - BWI76_RS09055 0.11 -1.2 1,910,397 - BWI76_RS09055 0.27 +1.8 1,910,418 - BWI76_RS09055 0.29 -0.4 1,910,463 + BWI76_RS09055 0.33 +0.1 1,910,725 - BWI76_RS09055 0.57 -0.3
Or see this region's nucleotide sequence