Experiment: Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0797 and BT0798 are separated by 77 nucleotides BT0798 and BT0799 are separated by 10 nucleotides BT0799 and BT0800 are separated by 1 nucleotides BT0800 and BT0801 are separated by 31 nucleotides BT0801 and BT0802 are separated by 29 nucleotides
BT0797: BT0797 - transcriptional regulator, ArsR family (NCBI ptt file), at 988,498 to 988,767
BT0797
BT0798: BT0798 - conserved hypothetical protein (NCBI ptt file), at 988,845 to 989,078
BT0798
BT0799: BT0799 - hypothetical protein (NCBI ptt file), at 989,089 to 989,532
BT0799
BT0800: BT0800 - conserved hypothetical protein (NCBI ptt file), at 989,534 to 990,241
BT0800
BT0801: BT0801 - arsenical resistance operon trans-acting repressor (NCBI ptt file), at 990,273 to 990,599
BT0801
BT0802: BT0802 - arsenical pump-driving ATPase (NCBI ptt file), at 990,629 to 992,341
BT0802
Position (kb) 989
990
991 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 988.672 kb on + strand, within BT0797 at 988.677 kb on + strand, within BT0797 at 988.681 kb on - strand, within BT0797 at 988.737 kb on + strand, within BT0797 at 988.737 kb on + strand, within BT0797 at 988.830 kb on - strand at 988.834 kb on + strand at 988.859 kb on - strand at 988.894 kb on - strand, within BT0798 at 988.977 kb on + strand, within BT0798 at 989.129 kb on + strand at 989.130 kb on - strand at 989.236 kb on - strand, within BT0799 at 989.262 kb on + strand, within BT0799 at 989.335 kb on - strand, within BT0799 at 989.695 kb on - strand, within BT0800 at 989.711 kb on - strand, within BT0800 at 989.733 kb on - strand, within BT0800 at 989.735 kb on - strand, within BT0800 at 989.739 kb on + strand, within BT0800 at 989.783 kb on - strand, within BT0800 at 989.787 kb on - strand, within BT0800 at 989.788 kb on + strand, within BT0800 at 989.810 kb on - strand, within BT0800 at 989.881 kb on - strand, within BT0800 at 990.017 kb on - strand, within BT0800 at 990.063 kb on + strand, within BT0800 at 990.064 kb on - strand, within BT0800 at 990.065 kb on + strand, within BT0800 at 990.066 kb on - strand, within BT0800 at 990.117 kb on - strand, within BT0800 at 990.202 kb on - strand at 990.208 kb on - strand at 990.436 kb on - strand, within BT0801 at 990.436 kb on - strand, within BT0801 at 990.598 kb on - strand at 990.603 kb on + strand at 990.894 kb on - strand, within BT0802 at 991.054 kb on + strand, within BT0802 at 991.055 kb on - strand, within BT0802 at 991.085 kb on - strand, within BT0802 at 991.120 kb on + strand, within BT0802 at 991.127 kb on - strand, within BT0802
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen remove 988,672 + BT0797 0.64 -0.6 988,677 + BT0797 0.66 -0.1 988,681 - BT0797 0.68 -1.1 988,737 + BT0797 0.89 -0.1 988,737 + BT0797 0.89 -2.1 988,830 - -1.0 988,834 + +0.9 988,859 - -1.2 988,894 - BT0798 0.21 -0.2 988,977 + BT0798 0.56 -1.1 989,129 + -1.1 989,130 - -1.3 989,236 - BT0799 0.33 -0.7 989,262 + BT0799 0.39 -0.1 989,335 - BT0799 0.55 +0.0 989,695 - BT0800 0.23 +0.9 989,711 - BT0800 0.25 -1.3 989,733 - BT0800 0.28 -1.1 989,735 - BT0800 0.28 +0.9 989,739 + BT0800 0.29 -0.4 989,783 - BT0800 0.35 -0.7 989,787 - BT0800 0.36 -0.7 989,788 + BT0800 0.36 -3.0 989,810 - BT0800 0.39 +1.9 989,881 - BT0800 0.49 -0.8 990,017 - BT0800 0.68 -1.9 990,063 + BT0800 0.75 -1.8 990,064 - BT0800 0.75 -0.4 990,065 + BT0800 0.75 -0.1 990,066 - BT0800 0.75 -1.9 990,117 - BT0800 0.82 -1.4 990,202 - -0.1 990,208 - +1.6 990,436 - BT0801 0.50 -0.7 990,436 - BT0801 0.50 +0.9 990,598 - -1.1 990,603 + +2.5 990,894 - BT0802 0.15 -0.4 991,054 + BT0802 0.25 +0.9 991,055 - BT0802 0.25 +0.3 991,085 - BT0802 0.27 -0.1 991,120 + BT0802 0.29 -1.3 991,127 - BT0802 0.29 -1.4
Or see this region's nucleotide sequence