Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22200 and BWI76_RS22205 overlap by 4 nucleotides BWI76_RS22205 and BWI76_RS22210 are separated by 236 nucleotides BWI76_RS22210 and BWI76_RS22215 are separated by 262 nucleotides BWI76_RS22215 and BWI76_RS22220 overlap by 4 nucleotides
BWI76_RS22200: BWI76_RS22200 - iron ABC transporter, at 4,629,011 to 4,629,874
_RS22200
BWI76_RS22205: BWI76_RS22205 - cation ABC transporter ATP-binding protein, at 4,629,871 to 4,630,548
_RS22205
BWI76_RS22210: BWI76_RS22210 - murein transglycosylase B, at 4,630,785 to 4,631,861
_RS22210
BWI76_RS22215: BWI76_RS22215 - PTS sorbitol transporter subunit IIC, at 4,632,124 to 4,632,687
_RS22215
BWI76_RS22220: BWI76_RS22220 - PTS glucitol/sorbitol transporter subunit IIB, at 4,632,684 to 4,633,661
_RS22220
Position (kb)
4630
4631
4632 Strain fitness (log2 ratio)
-1
0
1
2 at 4629.849 kb on + strand at 4629.927 kb on - strand at 4630.123 kb on - strand, within BWI76_RS22205 at 4630.233 kb on + strand, within BWI76_RS22205 at 4630.241 kb on - strand, within BWI76_RS22205 at 4630.497 kb on + strand at 4630.645 kb on + strand at 4631.308 kb on - strand, within BWI76_RS22210 at 4631.423 kb on + strand, within BWI76_RS22210 at 4631.433 kb on - strand, within BWI76_RS22210 at 4631.443 kb on + strand, within BWI76_RS22210 at 4631.453 kb on - strand, within BWI76_RS22210 at 4631.473 kb on - strand, within BWI76_RS22210 at 4631.795 kb on - strand at 4631.928 kb on - strand at 4632.049 kb on - strand at 4632.331 kb on + strand, within BWI76_RS22215 at 4632.390 kb on + strand, within BWI76_RS22215 at 4632.427 kb on - strand, within BWI76_RS22215 at 4632.560 kb on + strand, within BWI76_RS22215
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 4,629,849 + +0.5 4,629,927 - -0.2 4,630,123 - BWI76_RS22205 0.37 +0.6 4,630,233 + BWI76_RS22205 0.53 -0.1 4,630,241 - BWI76_RS22205 0.55 -0.1 4,630,497 + +1.0 4,630,645 + -0.3 4,631,308 - BWI76_RS22210 0.49 -0.2 4,631,423 + BWI76_RS22210 0.59 -1.0 4,631,433 - BWI76_RS22210 0.60 -1.3 4,631,443 + BWI76_RS22210 0.61 -1.7 4,631,453 - BWI76_RS22210 0.62 -0.1 4,631,473 - BWI76_RS22210 0.64 +0.6 4,631,795 - +0.3 4,631,928 - -1.4 4,632,049 - +1.8 4,632,331 + BWI76_RS22215 0.37 -0.1 4,632,390 + BWI76_RS22215 0.47 -0.7 4,632,427 - BWI76_RS22215 0.54 +0.1 4,632,560 + BWI76_RS22215 0.77 +0.1
Or see this region's nucleotide sequence