Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18350

Experiment: KLEB24 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB24 MOI 1
3,808,904	-		BWI76_RS18345	0.12	+0.3
3,808,957	+		BWI76_RS18345	0.20	-1.5
3,808,960	-		BWI76_RS18345	0.20	+0.8
3,809,027	-		BWI76_RS18345	0.29	-2.1
3,809,045	+		BWI76_RS18345	0.32	-1.5
3,809,046	+		BWI76_RS18345	0.32	+1.5
3,809,063	-		BWI76_RS18345	0.34	+0.0
3,809,063	-		BWI76_RS18345	0.34	-1.3
3,809,100	+		BWI76_RS18345	0.39	-0.1
3,809,109	+		BWI76_RS18345	0.41	-2.3
3,809,110	+		BWI76_RS18345	0.41	+0.7
3,809,115	+		BWI76_RS18345	0.41	-0.5
3,809,156	+		BWI76_RS18345	0.47	+0.4
3,809,164	-		BWI76_RS18345	0.48	+0.3
3,809,164	-		BWI76_RS18345	0.48	-0.2
3,809,164	-		BWI76_RS18345	0.48	+0.5
3,809,164	-		BWI76_RS18345	0.48	+2.1
3,809,166	+		BWI76_RS18345	0.48	+2.1
3,809,174	-		BWI76_RS18345	0.50	-0.0
3,809,174	-		BWI76_RS18345	0.50	+2.2
3,809,174	-		BWI76_RS18345	0.50	-0.2
3,809,174	-		BWI76_RS18345	0.50	+0.6
3,809,174	-		BWI76_RS18345	0.50	+1.1
3,809,176	-		BWI76_RS18345	0.50	-0.4
3,809,178	+		BWI76_RS18345	0.50	-1.0
3,809,292	+		BWI76_RS18345	0.66	-1.0
3,809,292	+		BWI76_RS18345	0.66	-0.2
3,809,295	-		BWI76_RS18345	0.66	+1.7
3,809,300	-		BWI76_RS18345	0.67	-0.1
3,809,300	-		BWI76_RS18345	0.67	-0.5
3,809,300	-		BWI76_RS18345	0.67	-0.9
3,809,336	+		BWI76_RS18345	0.72	-0.5
3,809,336	+		BWI76_RS18345	0.72	+0.8
3,809,344	-		BWI76_RS18345	0.73	+0.1
3,809,344	-		BWI76_RS18345	0.73	+0.8
3,809,344	-		BWI76_RS18345	0.73	-0.1
3,809,344	-		BWI76_RS18345	0.73	+0.3
3,809,344	-		BWI76_RS18345	0.73	+0.3
3,809,344	-		BWI76_RS18345	0.73	-0.1
3,809,344	-		BWI76_RS18345	0.73	-1.1
3,809,349	-		BWI76_RS18345	0.74	+2.1
3,809,354	+		BWI76_RS18345	0.74	+0.7
3,809,372	-		BWI76_RS18345	0.77	+0.6
3,809,372	-		BWI76_RS18345	0.77	+1.1
3,809,377	-		BWI76_RS18345	0.78	+0.8
3,809,377	-		BWI76_RS18345	0.78	+0.6
3,809,387	+		BWI76_RS18345	0.79	-0.9
3,809,397	+		BWI76_RS18345	0.80	-0.2
3,809,405	-		BWI76_RS18345	0.81	-0.4
3,809,405	-		BWI76_RS18345	0.81	-0.7
3,809,405	-		BWI76_RS18345	0.81	-0.1
3,809,417	-		BWI76_RS18345	0.83	+0.5
3,809,469	+				-0.2
3,809,477	-				+0.0
3,809,541	-				-0.5
3,809,548	+				+0.5
3,809,553	-				-0.4
3,809,556	-				+0.7
3,809,556	-				-0.3
3,809,556	-				+0.3
3,809,695	-				-0.5
3,809,698	+				+0.4
3,809,698	+				+0.3
3,809,698	+				-0.2
3,809,706	-				-0.4
3,809,723	+				+0.5
3,809,723	+				+0.9
3,809,723	+				-0.1
3,809,723	+				-1.6
3,809,723	-				-0.8
3,809,731	-				-0.4
3,809,748	-				-0.2
3,809,791	+				-0.2
3,809,799	-				+1.5
3,809,806	+				-2.3
3,809,819	-				-0.6
3,809,861	+				+2.7
3,809,866	+				+0.8
3,810,023	+		BWI76_RS18350	0.26	-0.9
3,810,198	+		BWI76_RS18350	0.49	-0.6
3,810,276	+		BWI76_RS18350	0.60	-1.1
3,810,324	-		BWI76_RS18350	0.66	-0.5
3,810,357	+		BWI76_RS18350	0.70	-0.9
3,810,365	-		BWI76_RS18350	0.71	-1.7
3,810,437	-		BWI76_RS18350	0.81	-1.0
3,810,518	-				+0.4
3,810,600	+				-0.4
3,810,724	+		BWI76_RS18355	0.22	-0.8
3,810,737	-		BWI76_RS18355	0.24	-0.3
3,811,005	-		BWI76_RS18355	0.64	+0.9
3,811,173	-		BWI76_RS18355	0.89	-0.2
3,811,226	+				-2.1
3,811,234	-				-0.3
3,811,286	+				-0.6
3,811,486	+		BWI76_RS18360	0.23	+0.1