Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06130
Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB24 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,287,253 | + | BWI76_RS06125 | 0.35 | -0.8 | |
1,287,364 | + | BWI76_RS06125 | 0.45 | +0.7 | |
1,287,477 | + | BWI76_RS06125 | 0.56 | +0.8 | |
1,287,490 | - | BWI76_RS06125 | 0.57 | -0.9 | |
1,287,506 | + | BWI76_RS06125 | 0.58 | -0.3 | |
1,287,657 | + | BWI76_RS06125 | 0.72 | +0.2 | |
1,287,705 | + | BWI76_RS06125 | 0.77 | -0.2 | |
1,287,760 | - | BWI76_RS06125 | 0.82 | -0.1 | |
1,287,766 | - | BWI76_RS06125 | 0.82 | +0.2 | |
1,287,990 | + | +0.6 | |||
1,288,076 | + | -0.1 | |||
1,288,122 | + | +1.0 | |||
1,288,615 | + | BWI76_RS06130 | 0.81 | -2.4 | |
1,288,623 | - | BWI76_RS06130 | 0.82 | -0.7 | |
1,288,768 | - | +1.5 | |||
1,288,768 | - | -1.5 | |||
1,289,043 | + | BWI76_RS06135 | 0.10 | -1.5 | |
1,289,056 | + | BWI76_RS06135 | 0.12 | -0.8 | |
1,289,240 | + | BWI76_RS06135 | 0.27 | -0.3 | |
1,289,294 | + | BWI76_RS06135 | 0.31 | -1.2 | |
1,289,345 | + | BWI76_RS06135 | 0.36 | -0.5 | |
1,289,545 | + | BWI76_RS06135 | 0.52 | +1.2 |
Or see this region's nucleotide sequence