Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01800 and BWI76_RS01805 are separated by 45 nucleotides BWI76_RS01805 and BWI76_RS01810 are separated by 8 nucleotides BWI76_RS01810 and BWI76_RS01815 are separated by 144 nucleotides
BWI76_RS01800: BWI76_RS01800 - glucose-6-phosphate isomerase, at 367,247 to 368,896
_RS01800
BWI76_RS01805: BWI76_RS01805 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 368,942 to 369,397
_RS01805
BWI76_RS01810: BWI76_RS01810 - N-acetyltransferase, at 369,406 to 369,915
_RS01810
BWI76_RS01815: BWI76_RS01815 - phosphate-starvation-inducible protein PsiE, at 370,060 to 370,470
_RS01815
Position (kb) 368
369
370 Strain fitness (log2 ratio) -2
-1
0
1
2 at 368.147 kb on + strand, within BWI76_RS01800 at 368.527 kb on + strand, within BWI76_RS01800 at 368.604 kb on + strand, within BWI76_RS01800 at 368.758 kb on - strand at 368.765 kb on - strand at 368.862 kb on + strand at 368.899 kb on + strand at 369.126 kb on + strand, within BWI76_RS01805 at 369.134 kb on - strand, within BWI76_RS01805 at 369.314 kb on + strand, within BWI76_RS01805 at 369.322 kb on + strand, within BWI76_RS01805 at 369.388 kb on + strand at 369.388 kb on + strand at 369.388 kb on + strand at 369.503 kb on - strand, within BWI76_RS01810 at 369.569 kb on - strand, within BWI76_RS01810 at 369.599 kb on + strand, within BWI76_RS01810 at 369.637 kb on - strand, within BWI76_RS01810 at 369.689 kb on - strand, within BWI76_RS01810 at 369.809 kb on - strand, within BWI76_RS01810 at 369.841 kb on - strand, within BWI76_RS01810 at 369.884 kb on - strand at 370.020 kb on + strand at 370.044 kb on + strand at 370.210 kb on - strand, within BWI76_RS01815 at 370.322 kb on + strand, within BWI76_RS01815
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 368,147 + BWI76_RS01800 0.55 +2.5 368,527 + BWI76_RS01800 0.78 +0.2 368,604 + BWI76_RS01800 0.82 +0.9 368,758 - +2.0 368,765 - +1.0 368,862 + -2.4 368,899 + -0.7 369,126 + BWI76_RS01805 0.40 -0.2 369,134 - BWI76_RS01805 0.42 -1.4 369,314 + BWI76_RS01805 0.82 -1.1 369,322 + BWI76_RS01805 0.83 -0.5 369,388 + +0.4 369,388 + +0.7 369,388 + -0.2 369,503 - BWI76_RS01810 0.19 -0.1 369,569 - BWI76_RS01810 0.32 -0.1 369,599 + BWI76_RS01810 0.38 -0.4 369,637 - BWI76_RS01810 0.45 +0.9 369,689 - BWI76_RS01810 0.55 -0.2 369,809 - BWI76_RS01810 0.79 -0.9 369,841 - BWI76_RS01810 0.85 +0.4 369,884 - -0.2 370,020 + -0.7 370,044 + +1.9 370,210 - BWI76_RS01815 0.36 -0.6 370,322 + BWI76_RS01815 0.64 -0.2
Or see this region's nucleotide sequence