Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26780 and BWI76_RS26785 are separated by 10 nucleotides BWI76_RS26785 and BWI76_RS26790 overlap by 4 nucleotides BWI76_RS26790 and BWI76_RS26795 are separated by 11 nucleotides
BWI76_RS26780: BWI76_RS26780 - cellulose synthase regulator BcsB, at 5,550,955 to 5,553,288
_RS26780
BWI76_RS26785: BWI76_RS26785 - UDP-forming cellulose synthase catalytic subunit, at 5,553,299 to 5,555,917
_RS26785
BWI76_RS26790: BWI76_RS26790 - cell division protein, at 5,555,914 to 5,556,651
_RS26790
BWI76_RS26795: BWI76_RS26795 - hypothetical protein, at 5,556,663 to 5,556,851
_RS26795
Position (kb) 5553
5554
5555
5556 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 5552.797 kb on - strand, within BWI76_RS26780 at 5552.936 kb on - strand, within BWI76_RS26780 at 5553.030 kb on + strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.048 kb on - strand, within BWI76_RS26780 at 5553.055 kb on - strand at 5553.370 kb on + strand at 5553.442 kb on + strand at 5553.510 kb on + strand at 5553.510 kb on + strand at 5553.549 kb on + strand at 5553.598 kb on + strand, within BWI76_RS26785 at 5553.626 kb on - strand, within BWI76_RS26785 at 5553.648 kb on + strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.846 kb on - strand, within BWI76_RS26785 at 5553.859 kb on + strand, within BWI76_RS26785 at 5553.966 kb on - strand, within BWI76_RS26785 at 5554.076 kb on - strand, within BWI76_RS26785 at 5554.083 kb on + strand, within BWI76_RS26785 at 5554.113 kb on + strand, within BWI76_RS26785 at 5554.124 kb on - strand, within BWI76_RS26785 at 5554.132 kb on - strand, within BWI76_RS26785 at 5554.180 kb on - strand, within BWI76_RS26785 at 5554.190 kb on + strand, within BWI76_RS26785 at 5554.661 kb on + strand, within BWI76_RS26785 at 5554.663 kb on - strand, within BWI76_RS26785 at 5554.793 kb on + strand, within BWI76_RS26785 at 5554.926 kb on + strand, within BWI76_RS26785 at 5555.042 kb on - strand, within BWI76_RS26785 at 5555.117 kb on - strand, within BWI76_RS26785 at 5555.117 kb on - strand, within BWI76_RS26785 at 5555.184 kb on + strand, within BWI76_RS26785 at 5555.265 kb on - strand, within BWI76_RS26785 at 5555.372 kb on - strand, within BWI76_RS26785 at 5555.413 kb on + strand, within BWI76_RS26785 at 5555.418 kb on + strand, within BWI76_RS26785 at 5555.421 kb on - strand, within BWI76_RS26785 at 5555.421 kb on - strand, within BWI76_RS26785 at 5555.426 kb on - strand, within BWI76_RS26785 at 5555.428 kb on + strand, within BWI76_RS26785 at 5555.503 kb on + strand, within BWI76_RS26785 at 5555.532 kb on + strand, within BWI76_RS26785 at 5555.669 kb on - strand at 5555.869 kb on + strand at 5555.938 kb on + strand at 5556.040 kb on + strand, within BWI76_RS26790 at 5556.222 kb on + strand, within BWI76_RS26790 at 5556.329 kb on + strand, within BWI76_RS26790 at 5556.361 kb on - strand, within BWI76_RS26790 at 5556.425 kb on + strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.435 kb on + strand, within BWI76_RS26790 at 5556.443 kb on - strand, within BWI76_RS26790 at 5556.467 kb on - strand, within BWI76_RS26790 at 5556.533 kb on + strand, within BWI76_RS26790 at 5556.537 kb on - strand, within BWI76_RS26790 at 5556.578 kb on + strand at 5556.578 kb on + strand at 5556.586 kb on - strand at 5556.586 kb on - strand at 5556.586 kb on - strand at 5556.591 kb on - strand at 5556.620 kb on - strand at 5556.689 kb on + strand, within BWI76_RS26795 at 5556.700 kb on + strand, within BWI76_RS26795 at 5556.708 kb on - strand, within BWI76_RS26795 at 5556.712 kb on + strand, within BWI76_RS26795 at 5556.720 kb on - strand, within BWI76_RS26795 at 5556.720 kb on - strand, within BWI76_RS26795 at 5556.761 kb on + strand, within BWI76_RS26795 at 5556.769 kb on - strand, within BWI76_RS26795 at 5556.774 kb on + strand, within BWI76_RS26795 at 5556.774 kb on + strand, within BWI76_RS26795 at 5556.782 kb on - strand, within BWI76_RS26795 at 5556.782 kb on - strand, within BWI76_RS26795 at 5556.802 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.809 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.820 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.823 kb on - strand, within BWI76_RS26795 at 5556.825 kb on + strand at 5556.825 kb on + strand, within BWI76_RS26795 at 5556.830 kb on + strand, within BWI76_RS26795 at 5556.830 kb on + strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.847 kb on - strand at 5556.899 kb on - strand at 5556.905 kb on - strand at 5556.905 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 5,552,797 - BWI76_RS26780 0.79 +0.8 5,552,936 - BWI76_RS26780 0.85 +1.5 5,553,030 + BWI76_RS26780 0.89 +1.9 5,553,038 - BWI76_RS26780 0.89 +1.1 5,553,038 - BWI76_RS26780 0.89 +0.4 5,553,048 - BWI76_RS26780 0.90 +1.8 5,553,055 - +1.5 5,553,370 + +1.0 5,553,442 + +0.0 5,553,510 + +1.4 5,553,510 + +1.0 5,553,549 + +1.2 5,553,598 + BWI76_RS26785 0.11 +1.7 5,553,626 - BWI76_RS26785 0.12 +3.3 5,553,648 + BWI76_RS26785 0.13 +0.7 5,553,767 - BWI76_RS26785 0.18 +2.7 5,553,767 - BWI76_RS26785 0.18 +1.7 5,553,846 - BWI76_RS26785 0.21 +1.3 5,553,859 + BWI76_RS26785 0.21 +1.2 5,553,966 - BWI76_RS26785 0.25 +2.7 5,554,076 - BWI76_RS26785 0.30 +1.8 5,554,083 + BWI76_RS26785 0.30 +2.0 5,554,113 + BWI76_RS26785 0.31 +2.0 5,554,124 - BWI76_RS26785 0.32 +2.1 5,554,132 - BWI76_RS26785 0.32 +1.3 5,554,180 - BWI76_RS26785 0.34 +2.2 5,554,190 + BWI76_RS26785 0.34 +2.2 5,554,661 + BWI76_RS26785 0.52 +1.4 5,554,663 - BWI76_RS26785 0.52 +2.1 5,554,793 + BWI76_RS26785 0.57 +1.4 5,554,926 + BWI76_RS26785 0.62 +2.0 5,555,042 - BWI76_RS26785 0.67 +1.0 5,555,117 - BWI76_RS26785 0.69 +1.5 5,555,117 - BWI76_RS26785 0.69 +1.6 5,555,184 + BWI76_RS26785 0.72 +1.4 5,555,265 - BWI76_RS26785 0.75 +1.1 5,555,372 - BWI76_RS26785 0.79 +1.0 5,555,413 + BWI76_RS26785 0.81 +1.3 5,555,418 + BWI76_RS26785 0.81 +1.5 5,555,421 - BWI76_RS26785 0.81 +1.2 5,555,421 - BWI76_RS26785 0.81 +2.2 5,555,426 - BWI76_RS26785 0.81 +1.4 5,555,428 + BWI76_RS26785 0.81 +3.0 5,555,503 + BWI76_RS26785 0.84 +1.9 5,555,532 + BWI76_RS26785 0.85 +1.7 5,555,669 - +1.7 5,555,869 + +1.8 5,555,938 + +0.8 5,556,040 + BWI76_RS26790 0.17 +1.6 5,556,222 + BWI76_RS26790 0.42 +2.3 5,556,329 + BWI76_RS26790 0.56 +1.0 5,556,361 - BWI76_RS26790 0.61 +2.9 5,556,425 + BWI76_RS26790 0.69 +1.0 5,556,433 - BWI76_RS26790 0.70 +1.5 5,556,433 - BWI76_RS26790 0.70 +1.3 5,556,433 - BWI76_RS26790 0.70 +2.1 5,556,433 - BWI76_RS26790 0.70 +1.3 5,556,435 + BWI76_RS26790 0.71 +0.5 5,556,443 - BWI76_RS26790 0.72 +1.5 5,556,467 - BWI76_RS26790 0.75 +1.2 5,556,533 + BWI76_RS26790 0.84 +1.3 5,556,537 - BWI76_RS26790 0.84 +0.9 5,556,578 + +0.5 5,556,578 + +1.3 5,556,586 - +0.9 5,556,586 - +1.6 5,556,586 - +1.5 5,556,591 - +2.0 5,556,620 - +0.9 5,556,689 + BWI76_RS26795 0.14 +1.7 5,556,700 + BWI76_RS26795 0.20 +0.4 5,556,708 - BWI76_RS26795 0.24 +1.9 5,556,712 + BWI76_RS26795 0.26 +1.7 5,556,720 - BWI76_RS26795 0.30 +2.9 5,556,720 - BWI76_RS26795 0.30 +2.0 5,556,761 + BWI76_RS26795 0.52 +2.0 5,556,769 - BWI76_RS26795 0.56 +1.1 5,556,774 + BWI76_RS26795 0.59 +0.6 5,556,774 + BWI76_RS26795 0.59 +2.7 5,556,782 - BWI76_RS26795 0.63 +4.4 5,556,782 - BWI76_RS26795 0.63 +1.1 5,556,802 + BWI76_RS26795 0.74 +1.3 5,556,807 + BWI76_RS26795 0.76 +1.6 5,556,807 + BWI76_RS26795 0.76 +0.6 5,556,807 + BWI76_RS26795 0.76 +3.4 5,556,807 + BWI76_RS26795 0.76 +0.7 5,556,809 - BWI76_RS26795 0.77 +0.7 5,556,810 - BWI76_RS26795 0.78 -0.9 5,556,810 - BWI76_RS26795 0.78 -0.3 5,556,810 - BWI76_RS26795 0.78 +0.8 5,556,810 - BWI76_RS26795 0.78 +0.4 5,556,810 - BWI76_RS26795 0.78 +1.0 5,556,810 - BWI76_RS26795 0.78 -0.2 5,556,810 - BWI76_RS26795 0.78 -0.2 5,556,810 - BWI76_RS26795 0.78 +0.5 5,556,810 - BWI76_RS26795 0.78 +0.6 5,556,810 - BWI76_RS26795 0.78 +0.3 5,556,815 - BWI76_RS26795 0.80 +0.6 5,556,815 - BWI76_RS26795 0.80 +2.4 5,556,815 - BWI76_RS26795 0.80 +1.3 5,556,815 - BWI76_RS26795 0.80 +0.8 5,556,820 + BWI76_RS26795 0.83 +2.5 5,556,822 + BWI76_RS26795 0.84 +1.7 5,556,822 + BWI76_RS26795 0.84 +1.9 5,556,822 + BWI76_RS26795 0.84 +0.8 5,556,822 + BWI76_RS26795 0.84 +1.4 5,556,823 - BWI76_RS26795 0.85 +1.6 5,556,825 + +1.6 5,556,825 + BWI76_RS26795 0.86 +2.0 5,556,830 + BWI76_RS26795 0.88 +1.6 5,556,830 + BWI76_RS26795 0.88 +1.5 5,556,830 - BWI76_RS26795 0.88 +0.9 5,556,830 - BWI76_RS26795 0.88 +1.3 5,556,830 - BWI76_RS26795 0.88 +1.5 5,556,830 - BWI76_RS26795 0.88 +1.3 5,556,830 - BWI76_RS26795 0.88 +1.5 5,556,833 - +1.4 5,556,833 - +1.4 5,556,833 - +0.7 5,556,833 - +0.8 5,556,847 - +1.7 5,556,899 - +0.9 5,556,905 - +1.0 5,556,905 - +1.1
Or see this region's nucleotide sequence