Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15565 and BWI76_RS15570 are separated by 78 nucleotides BWI76_RS15570 and BWI76_RS15575 are separated by 67 nucleotides BWI76_RS15575 and BWI76_RS15580 overlap by 11 nucleotides BWI76_RS15580 and BWI76_RS15585 are separated by 112 nucleotides BWI76_RS15585 and BWI76_RS15590 are separated by 182 nucleotides
BWI76_RS15565: BWI76_RS15565 - hypothetical protein, at 3,260,578 to 3,260,790
_RS15565
BWI76_RS15570: BWI76_RS15570 - phage antirepressor Ant, at 3,260,869 to 3,261,642
_RS15570
BWI76_RS15575: BWI76_RS15575 - hypothetical protein, at 3,261,710 to 3,262,429
_RS15575
BWI76_RS15580: BWI76_RS15580 - putative transcriptional repressor arc (modular protein), at 3,262,419 to 3,262,592
_RS15580
BWI76_RS15585: BWI76_RS15585 - DNA-binding protein, at 3,262,705 to 3,263,067
_RS15585
BWI76_RS15590: BWI76_RS15590 - hypothetical protein, at 3,263,250 to 3,263,957
_RS15590
Position (kb)
3261
3262
3263 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3260.741 kb on - strand, within BWI76_RS15565 at 3260.741 kb on - strand, within BWI76_RS15565 at 3260.842 kb on - strand at 3260.854 kb on + strand at 3260.867 kb on + strand at 3260.875 kb on - strand at 3260.929 kb on - strand at 3261.039 kb on - strand, within BWI76_RS15570 at 3261.283 kb on - strand, within BWI76_RS15570 at 3261.526 kb on + strand, within BWI76_RS15570 at 3261.534 kb on - strand, within BWI76_RS15570 at 3261.747 kb on - strand at 3261.755 kb on + strand at 3262.170 kb on - strand, within BWI76_RS15575 at 3262.267 kb on + strand, within BWI76_RS15575 at 3262.308 kb on - strand, within BWI76_RS15575 at 3262.338 kb on - strand, within BWI76_RS15575 at 3262.341 kb on - strand, within BWI76_RS15575 at 3262.400 kb on + strand at 3262.408 kb on - strand at 3262.702 kb on + strand at 3263.301 kb on + strand at 3263.403 kb on + strand, within BWI76_RS15590
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 3,260,741 - BWI76_RS15565 0.77 -2.2 3,260,741 - BWI76_RS15565 0.77 -0.2 3,260,842 - -0.2 3,260,854 + -1.1 3,260,867 + -1.2 3,260,875 - -1.7 3,260,929 - -0.7 3,261,039 - BWI76_RS15570 0.22 +2.2 3,261,283 - BWI76_RS15570 0.53 -0.1 3,261,526 + BWI76_RS15570 0.85 +0.7 3,261,534 - BWI76_RS15570 0.86 -0.5 3,261,747 - -0.2 3,261,755 + -1.9 3,262,170 - BWI76_RS15575 0.64 -1.4 3,262,267 + BWI76_RS15575 0.77 -0.8 3,262,308 - BWI76_RS15575 0.83 -0.6 3,262,338 - BWI76_RS15575 0.87 -1.2 3,262,341 - BWI76_RS15575 0.88 -1.1 3,262,400 + +1.3 3,262,408 - +2.1 3,262,702 + -0.6 3,263,301 + +0.8 3,263,403 + BWI76_RS15590 0.22 -1.2
Or see this region's nucleotide sequence