Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS15165

Experiment: KLEB24 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB24 MOI 1
3,178,216	+		BWI76_RS15155	0.30	-1.5
3,178,217	-		BWI76_RS15155	0.30	-0.9
3,178,217	-		BWI76_RS15155	0.30	-0.5
3,178,224	-		BWI76_RS15155	0.32	+0.2
3,178,227	+		BWI76_RS15155	0.33	-2.7
3,178,232	+		BWI76_RS15155	0.34	+0.1
3,178,235	-		BWI76_RS15155	0.35	+0.3
3,178,235	-		BWI76_RS15155	0.35	+0.4
3,178,245	-		BWI76_RS15155	0.38	-0.7
3,178,246	+		BWI76_RS15155	0.38	+0.4
3,178,277	-		BWI76_RS15155	0.47	+0.5
3,178,378	-		BWI76_RS15155	0.74	+1.0
3,178,378	-		BWI76_RS15155	0.74	-1.8
3,178,422	+		BWI76_RS15155	0.86	-0.5
3,178,429	+		BWI76_RS15155	0.88	-1.8
3,178,437	-				-0.6
3,178,504	+				+0.7
3,178,514	+				+0.8
3,178,514	+				-0.6
3,178,514	+				-0.4
3,178,519	+				-0.1
3,178,519	+				-1.1
3,178,519	+				+1.0
3,178,522	-				+0.7
3,178,522	-				+1.7
3,178,539	-				-0.5
3,178,574	-				-2.1
3,178,607	-		BWI76_RS15160	0.15	+0.0
3,178,607	-		BWI76_RS15160	0.15	+0.0
3,178,609	+		BWI76_RS15160	0.15	-0.6
3,178,609	+		BWI76_RS15160	0.15	-1.7
3,178,609	+		BWI76_RS15160	0.15	-1.4
3,178,617	+		BWI76_RS15160	0.17	-0.4
3,178,617	-		BWI76_RS15160	0.17	+0.9
3,178,617	-		BWI76_RS15160	0.17	-2.0
3,178,617	-		BWI76_RS15160	0.17	-0.8
3,178,627	+		BWI76_RS15160	0.19	-1.3
3,178,669	-		BWI76_RS15160	0.29	+0.5
3,178,684	-		BWI76_RS15160	0.33	+0.9
3,178,691	-		BWI76_RS15160	0.35	-1.7
3,178,691	-		BWI76_RS15160	0.35	+1.5
3,178,694	-		BWI76_RS15160	0.35	+0.8
3,178,723	-		BWI76_RS15160	0.42	-0.5
3,178,805	+		BWI76_RS15160	0.62	-0.3
3,178,863	+		BWI76_RS15160	0.75	+1.1
3,178,863	+		BWI76_RS15160	0.75	+0.3
3,178,863	+		BWI76_RS15160	0.75	-1.4
3,178,863	+		BWI76_RS15160	0.75	-0.5
3,178,863	+		BWI76_RS15160	0.75	-1.1
3,178,863	+		BWI76_RS15160	0.75	+0.8
3,178,863	+		BWI76_RS15160	0.75	+0.9
3,178,863	+		BWI76_RS15160	0.75	-2.6
3,178,868	+				+1.3
3,178,871	-		BWI76_RS15160	0.77	-0.4
3,178,871	-		BWI76_RS15160	0.77	-1.7
3,178,871	-		BWI76_RS15160	0.77	-1.4
3,178,871	-		BWI76_RS15160	0.77	-2.8
3,178,871	-				+0.9
3,178,871	-		BWI76_RS15160	0.77	-1.4
3,178,871	-		BWI76_RS15160	0.77	-0.5
3,178,876	-		BWI76_RS15160	0.79	-0.7
3,178,878	+		BWI76_RS15160	0.79	+0.6
3,178,886	-				+0.9
3,178,894	+		BWI76_RS15160	0.83	-1.0
3,178,894	+		BWI76_RS15160	0.83	-0.6
3,178,950	+				+1.4
3,178,969	-				-0.1
3,179,101	+				-0.4
3,179,101	+				-0.9
3,179,109	+				-1.1
3,179,109	-				+0.9
3,179,109	-				-0.6
3,179,126	+				+1.2
3,179,126	+				+0.1
3,179,127	+				+1.9
3,179,127	+				+1.1
3,179,127	+				+0.3
3,179,127	+				+0.9
3,179,127	+				-1.4
3,179,127	+				-1.9
3,179,127	+				+1.1
3,179,127	+				-2.4
3,179,127	+				-0.4
3,179,127	+				-1.3
3,179,127	+				-3.5
3,179,127	+				+1.9
3,179,127	+				-1.1
3,179,127	+				+0.1
3,179,127	+				+1.8
3,179,127	+				+0.2
3,179,127	+				-0.7
3,179,127	+				-0.7
3,179,127	+				-1.7
3,179,127	+				-0.7
3,179,127	+				+2.6
3,179,127	+				-0.7
3,179,127	+				+0.9
3,179,134	-				+0.9
3,179,135	-				-0.2
3,179,135	-				+0.9
3,179,135	-				+0.5
3,179,135	-				-0.7
3,179,135	-				+0.6
3,179,135	-				+0.3
3,179,135	-				-0.7
3,179,135	-				-0.8
3,179,135	-				+0.1
3,179,135	-				+2.4
3,179,135	-				+1.5
3,179,135	-				+0.7
3,179,135	-				-0.9
3,179,135	-				+1.6
3,179,135	-				+1.2
3,179,135	-				-0.6
3,179,135	-				+2.7
3,179,135	-				-0.3
3,179,135	-				-1.7
3,179,135	-				+0.3
3,179,135	-				-0.2
3,179,135	-				+0.4
3,179,135	-				+0.0
3,179,135	-				-0.2
3,179,135	-				+0.5
3,179,135	-				+2.3
3,179,205	+				+1.7
3,179,264	-				-1.0
3,179,264	-				-0.6
3,179,276	-				-0.2
3,179,276	-				-1.4
3,179,276	-				-0.4
3,179,276	-				+1.0
3,179,284	-				-0.0
3,179,350	+		BWI76_RS15165	0.18	-0.8
3,179,367	+		BWI76_RS15165	0.20	-0.4
3,179,375	-		BWI76_RS15165	0.21	-1.4
3,179,375	-		BWI76_RS15165	0.21	-0.6
3,179,552	+		BWI76_RS15165	0.43	-1.1
3,179,709	-		BWI76_RS15165	0.63	-0.3
3,179,745	+		BWI76_RS15165	0.67	-3.4
3,179,801	+		BWI76_RS15165	0.74	-0.7
3,179,816	-		BWI76_RS15165	0.76	-1.1
3,180,042	-				-0.4
3,180,072	-				-0.2
3,180,257	-				+1.5
3,180,758	+		BWI76_RS15170	0.75	+1.3