Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14055 and BWI76_RS14060 are separated by 168 nucleotides BWI76_RS14060 and BWI76_RS14065 are separated by 338 nucleotides BWI76_RS14065 and BWI76_RS14070 are separated by 5 nucleotides
BWI76_RS14055: BWI76_RS14055 - LacI family transcriptional regulator, at 2,937,277 to 2,938,311
_RS14055
BWI76_RS14060: BWI76_RS14060 - secretory lipase, at 2,938,480 to 2,939,622
_RS14060
BWI76_RS14065: BWI76_RS14065 - hypothetical protein, at 2,939,961 to 2,940,386
_RS14065
BWI76_RS14070: BWI76_RS14070 - ECF subfamily RNA polymerase sigma-24 subunit, at 2,940,392 to 2,940,952
_RS14070
Position (kb)
2938
2939
2940 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2937.617 kb on - strand, within BWI76_RS14055 at 2937.626 kb on + strand, within BWI76_RS14055 at 2937.671 kb on - strand at 2937.853 kb on + strand, within BWI76_RS14055 at 2937.856 kb on + strand, within BWI76_RS14055 at 2937.863 kb on - strand, within BWI76_RS14055 at 2937.888 kb on - strand, within BWI76_RS14055 at 2938.249 kb on - strand at 2938.421 kb on + strand at 2938.452 kb on - strand at 2938.492 kb on - strand at 2938.525 kb on - strand at 2938.801 kb on - strand, within BWI76_RS14060 at 2938.858 kb on - strand, within BWI76_RS14060 at 2939.004 kb on + strand, within BWI76_RS14060 at 2939.229 kb on + strand, within BWI76_RS14060 at 2939.381 kb on - strand, within BWI76_RS14060 at 2939.675 kb on - strand at 2939.823 kb on - strand at 2939.923 kb on - strand at 2939.923 kb on - strand at 2939.925 kb on + strand at 2939.933 kb on - strand at 2940.146 kb on - strand, within BWI76_RS14065 at 2940.253 kb on + strand, within BWI76_RS14065 at 2940.261 kb on - strand, within BWI76_RS14065
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 2,937,617 - BWI76_RS14055 0.33 -2.1 2,937,626 + BWI76_RS14055 0.34 +0.9 2,937,671 - -0.1 2,937,853 + BWI76_RS14055 0.56 +0.9 2,937,856 + BWI76_RS14055 0.56 -0.5 2,937,863 - BWI76_RS14055 0.57 -0.4 2,937,888 - BWI76_RS14055 0.59 +2.4 2,938,249 - +0.2 2,938,421 + -0.4 2,938,452 - +0.3 2,938,492 - -1.8 2,938,525 - -0.1 2,938,801 - BWI76_RS14060 0.28 -0.6 2,938,858 - BWI76_RS14060 0.33 +0.0 2,939,004 + BWI76_RS14060 0.46 -1.8 2,939,229 + BWI76_RS14060 0.66 -0.7 2,939,381 - BWI76_RS14060 0.79 -0.5 2,939,675 - +0.2 2,939,823 - -0.3 2,939,923 - +0.4 2,939,923 - -0.8 2,939,925 + -1.5 2,939,933 - -1.1 2,940,146 - BWI76_RS14065 0.43 -1.1 2,940,253 + BWI76_RS14065 0.69 +0.6 2,940,261 - BWI76_RS14065 0.70 -0.7
Or see this region's nucleotide sequence