Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS12745

Experiment: KLEB24 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB24 MOI 1
2,657,759	+		BWI76_RS12735	0.84	+0.0
2,657,826	+				+0.3
2,658,223	-				-1.6
2,658,237	+				-0.4
2,658,264	-				+0.0
2,658,264	-				-0.8
2,658,358	+		BWI76_RS12740	0.23	+1.1
2,658,361	-		BWI76_RS12740	0.24	-0.6
2,658,366	-		BWI76_RS12740	0.26	-0.9
2,658,366	-		BWI76_RS12740	0.26	-1.0
2,658,377	+		BWI76_RS12740	0.29	-0.6
2,658,385	-		BWI76_RS12740	0.31	-0.1
2,658,398	+		BWI76_RS12740	0.34	+0.9
2,658,398	+		BWI76_RS12740	0.34	-1.2
2,658,404	+		BWI76_RS12740	0.36	-0.2
2,658,406	-		BWI76_RS12740	0.37	-0.3
2,658,406	-		BWI76_RS12740	0.37	-2.2
2,658,406	-				+0.7
2,658,412	-		BWI76_RS12740	0.38	+0.2
2,658,412	-		BWI76_RS12740	0.38	+0.1
2,658,417	+		BWI76_RS12740	0.40	+3.1
2,658,419	+		BWI76_RS12740	0.40	-0.3
2,658,419	+		BWI76_RS12740	0.40	+0.7
2,658,422	-		BWI76_RS12740	0.41	-1.8
2,658,425	-		BWI76_RS12740	0.42	+0.7
2,658,427	-		BWI76_RS12740	0.42	+1.7
2,658,427	-		BWI76_RS12740	0.42	+0.1
2,658,430	+		BWI76_RS12740	0.43	+1.4
2,658,430	+		BWI76_RS12740	0.43	+2.1
2,658,430	+		BWI76_RS12740	0.43	+0.7
2,658,430	+		BWI76_RS12740	0.43	+2.3
2,658,436	-		BWI76_RS12740	0.45	-0.6
2,658,438	-		BWI76_RS12740	0.45	+0.2
2,658,438	-		BWI76_RS12740	0.45	+0.5
2,658,438	-		BWI76_RS12740	0.45	+0.9
2,658,438	-		BWI76_RS12740	0.45	-0.1
2,658,438	-		BWI76_RS12740	0.45	+0.6
2,658,478	-		BWI76_RS12740	0.56	-3.3
2,658,548	+		BWI76_RS12740	0.76	-0.3
2,658,556	-		BWI76_RS12740	0.78	-0.4
2,658,619	+				-2.9
2,658,631	+				-1.3
2,658,638	+				+0.1
2,658,646	-				-2.3
2,658,689	-				+3.5
2,658,696	+				-0.3
2,658,704	-				-1.3
2,658,708	+				-0.1
2,658,714	-				-0.3
2,658,714	-				-0.3
2,658,716	-				-1.3
2,658,918	-		BWI76_RS12745	0.52	+0.7
2,658,955	+		BWI76_RS12745	0.62	+0.3
2,658,963	-		BWI76_RS12745	0.64	-1.0
2,658,987	-		BWI76_RS12745	0.70	-0.8
2,658,994	-		BWI76_RS12745	0.72	-0.0
2,659,056	+		BWI76_RS12745	0.88	-2.1
2,659,117	+				-0.3
2,659,117	+				+0.7
2,659,117	+				+0.6
2,659,117	+				+2.0
2,659,122	+		BWI76_RS12750	0.10	-3.2
2,659,122	+		BWI76_RS12750	0.10	-0.3
2,659,125	-		BWI76_RS12750	0.11	-0.7
2,659,130	-		BWI76_RS12750	0.13	-0.3
2,659,130	-		BWI76_RS12750	0.13	-0.3
2,659,177	+		BWI76_RS12750	0.30	+0.5
2,659,325	+		BWI76_RS12750	0.85	+0.6
2,659,325	+		BWI76_RS12750	0.85	+1.1
2,659,327	+		BWI76_RS12750	0.85	-0.8
2,659,330	+		BWI76_RS12750	0.86	-1.3
2,659,440	+		BWI76_RS12755	0.12	-0.8
2,659,440	+		BWI76_RS12755	0.12	+1.2
2,659,440	+		BWI76_RS12755	0.12	-1.8
2,659,487	+		BWI76_RS12755	0.21	-1.1
2,659,487	+		BWI76_RS12755	0.21	-0.3
2,659,495	-		BWI76_RS12755	0.22	-0.6
2,659,544	+		BWI76_RS12755	0.31	-0.8
2,659,552	-		BWI76_RS12755	0.33	-0.5
2,659,647	+				-0.8
2,659,736	-		BWI76_RS12755	0.67	+2.3
2,659,739	+		BWI76_RS12755	0.67	-0.4
2,659,881	+				+0.7
2,659,881	+				+0.0
2,659,986	+				+0.6
2,659,987	+				-1.6
2,659,996	+				+0.7
2,659,996	+				+0.2
2,660,063	+				+2.3
2,660,063	+				+1.5