Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08435 and BWI76_RS08440 are separated by 383 nucleotides BWI76_RS08440 and BWI76_RS08445 are separated by 185 nucleotides BWI76_RS08445 and BWI76_RS08450 are separated by 9 nucleotides
BWI76_RS08435: BWI76_RS08435 - AraC family transcriptional regulator, at 1,785,658 to 1,786,350
_RS08435
BWI76_RS08440: BWI76_RS08440 - hypothetical protein, at 1,786,734 to 1,787,636
_RS08440
BWI76_RS08445: BWI76_RS08445 - cob(I)yrinic acid a,c-diamide adenosyltransferase, at 1,787,822 to 1,788,424
_RS08445
BWI76_RS08450: BWI76_RS08450 - fumarate hydratase, at 1,788,434 to 1,790,086
_RS08450
Position (kb)
1786
1787
1788 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1785.736 kb on + strand, within BWI76_RS08435 at 1785.738 kb on - strand, within BWI76_RS08435 at 1785.738 kb on - strand, within BWI76_RS08435 at 1785.738 kb on - strand, within BWI76_RS08435 at 1785.738 kb on - strand, within BWI76_RS08435 at 1785.745 kb on - strand, within BWI76_RS08435 at 1785.772 kb on + strand, within BWI76_RS08435 at 1785.780 kb on - strand, within BWI76_RS08435 at 1785.796 kb on + strand, within BWI76_RS08435 at 1785.796 kb on + strand, within BWI76_RS08435 at 1785.796 kb on + strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.804 kb on - strand, within BWI76_RS08435 at 1785.862 kb on - strand, within BWI76_RS08435 at 1786.032 kb on + strand, within BWI76_RS08435 at 1786.192 kb on + strand, within BWI76_RS08435 at 1786.201 kb on + strand at 1786.201 kb on + strand, within BWI76_RS08435 at 1786.201 kb on + strand, within BWI76_RS08435 at 1786.209 kb on - strand, within BWI76_RS08435 at 1786.211 kb on + strand, within BWI76_RS08435 at 1786.218 kb on + strand, within BWI76_RS08435 at 1786.223 kb on + strand, within BWI76_RS08435 at 1786.236 kb on + strand, within BWI76_RS08435 at 1786.236 kb on + strand, within BWI76_RS08435 at 1786.236 kb on + strand, within BWI76_RS08435 at 1786.244 kb on - strand, within BWI76_RS08435 at 1786.244 kb on - strand, within BWI76_RS08435 at 1786.272 kb on + strand, within BWI76_RS08435 at 1786.295 kb on + strand at 1786.295 kb on + strand at 1786.295 kb on + strand at 1786.295 kb on + strand at 1786.295 kb on + strand at 1786.295 kb on + strand at 1786.303 kb on - strand at 1786.303 kb on - strand at 1786.303 kb on - strand at 1786.313 kb on - strand at 1786.331 kb on + strand at 1786.465 kb on - strand at 1786.616 kb on + strand at 1786.661 kb on + strand at 1786.669 kb on - strand at 1786.674 kb on - strand at 1786.716 kb on + strand at 1786.724 kb on - strand at 1786.763 kb on + strand at 1786.764 kb on + strand at 1786.766 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.771 kb on + strand at 1786.779 kb on - strand at 1786.779 kb on - strand at 1786.779 kb on - strand at 1786.797 kb on + strand at 1786.798 kb on + strand at 1786.798 kb on + strand at 1786.812 kb on + strand at 1786.812 kb on + strand at 1786.818 kb on + strand at 1786.826 kb on - strand, within BWI76_RS08440 at 1786.826 kb on - strand, within BWI76_RS08440 at 1786.830 kb on + strand, within BWI76_RS08440 at 1786.853 kb on + strand, within BWI76_RS08440 at 1786.853 kb on + strand, within BWI76_RS08440 at 1786.861 kb on - strand, within BWI76_RS08440 at 1786.862 kb on - strand, within BWI76_RS08440 at 1786.865 kb on + strand, within BWI76_RS08440 at 1786.934 kb on + strand, within BWI76_RS08440 at 1786.954 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.020 kb on + strand, within BWI76_RS08440 at 1787.021 kb on - strand, within BWI76_RS08440 at 1787.026 kb on + strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.028 kb on - strand, within BWI76_RS08440 at 1787.033 kb on + strand, within BWI76_RS08440 at 1787.038 kb on + strand, within BWI76_RS08440 at 1787.043 kb on + strand, within BWI76_RS08440 at 1787.046 kb on - strand, within BWI76_RS08440 at 1787.046 kb on - strand, within BWI76_RS08440 at 1787.051 kb on - strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on + strand, within BWI76_RS08440 at 1787.053 kb on - strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.065 kb on + strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.073 kb on - strand, within BWI76_RS08440 at 1787.202 kb on + strand, within BWI76_RS08440 at 1787.246 kb on - strand, within BWI76_RS08440 at 1787.258 kb on + strand, within BWI76_RS08440 at 1787.323 kb on - strand, within BWI76_RS08440 at 1787.350 kb on + strand, within BWI76_RS08440 at 1787.406 kb on - strand, within BWI76_RS08440 at 1787.406 kb on - strand, within BWI76_RS08440 at 1787.614 kb on + strand at 1787.792 kb on - strand at 1787.913 kb on - strand, within BWI76_RS08445 at 1788.016 kb on + strand, within BWI76_RS08445 at 1788.018 kb on + strand, within BWI76_RS08445 at 1788.026 kb on - strand, within BWI76_RS08445 at 1788.186 kb on + strand, within BWI76_RS08445 at 1788.221 kb on - strand, within BWI76_RS08445 at 1788.280 kb on - strand, within BWI76_RS08445 at 1788.432 kb on + strand at 1788.585 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 1,785,736 + BWI76_RS08435 0.11 +0.8 1,785,738 - BWI76_RS08435 0.12 +0.5 1,785,738 - BWI76_RS08435 0.12 -0.5 1,785,738 - BWI76_RS08435 0.12 -1.1 1,785,738 - BWI76_RS08435 0.12 +0.2 1,785,745 - BWI76_RS08435 0.13 +0.0 1,785,772 + BWI76_RS08435 0.16 +2.3 1,785,780 - BWI76_RS08435 0.18 +0.5 1,785,796 + BWI76_RS08435 0.20 +0.9 1,785,796 + BWI76_RS08435 0.20 -1.1 1,785,796 + BWI76_RS08435 0.20 +0.5 1,785,804 - BWI76_RS08435 0.21 +0.1 1,785,804 - BWI76_RS08435 0.21 +3.1 1,785,804 - BWI76_RS08435 0.21 -1.3 1,785,804 - BWI76_RS08435 0.21 -1.1 1,785,804 - BWI76_RS08435 0.21 +2.1 1,785,804 - BWI76_RS08435 0.21 -0.7 1,785,862 - BWI76_RS08435 0.29 -0.5 1,786,032 + BWI76_RS08435 0.54 +1.3 1,786,192 + BWI76_RS08435 0.77 +1.8 1,786,201 + +0.1 1,786,201 + BWI76_RS08435 0.78 +0.4 1,786,201 + BWI76_RS08435 0.78 +2.8 1,786,209 - BWI76_RS08435 0.80 +1.9 1,786,211 + BWI76_RS08435 0.80 +0.3 1,786,218 + BWI76_RS08435 0.81 +0.9 1,786,223 + BWI76_RS08435 0.82 +0.7 1,786,236 + BWI76_RS08435 0.83 -2.3 1,786,236 + BWI76_RS08435 0.83 -0.9 1,786,236 + BWI76_RS08435 0.83 +0.5 1,786,244 - BWI76_RS08435 0.85 +1.1 1,786,244 - BWI76_RS08435 0.85 -2.1 1,786,272 + BWI76_RS08435 0.89 -0.3 1,786,295 + -0.8 1,786,295 + +0.2 1,786,295 + -1.9 1,786,295 + +1.3 1,786,295 + +0.6 1,786,295 + -1.3 1,786,303 - -1.5 1,786,303 - +0.8 1,786,303 - -0.5 1,786,313 - -0.7 1,786,331 + +0.5 1,786,465 - +0.2 1,786,616 + -0.6 1,786,661 + +0.6 1,786,669 - +0.3 1,786,674 - +0.6 1,786,716 + +1.1 1,786,724 - +0.5 1,786,763 + +0.2 1,786,764 + +0.1 1,786,766 + +0.6 1,786,771 + +0.5 1,786,771 + -0.5 1,786,771 + -0.2 1,786,771 + +1.2 1,786,771 + +1.3 1,786,771 + -0.9 1,786,771 + -2.1 1,786,771 + +0.7 1,786,771 + +0.2 1,786,779 - +2.3 1,786,779 - +3.6 1,786,779 - +0.6 1,786,797 + +0.3 1,786,798 + +2.0 1,786,798 + -0.4 1,786,812 + +0.9 1,786,812 + +0.2 1,786,818 + -0.3 1,786,826 - BWI76_RS08440 0.10 +0.5 1,786,826 - BWI76_RS08440 0.10 -0.6 1,786,830 + BWI76_RS08440 0.11 +3.1 1,786,853 + BWI76_RS08440 0.13 -0.1 1,786,853 + BWI76_RS08440 0.13 +0.4 1,786,861 - BWI76_RS08440 0.14 -0.5 1,786,862 - BWI76_RS08440 0.14 +1.0 1,786,865 + BWI76_RS08440 0.15 +0.2 1,786,934 + BWI76_RS08440 0.22 +1.1 1,786,954 + BWI76_RS08440 0.24 +0.8 1,787,020 + BWI76_RS08440 0.32 +0.5 1,787,020 + BWI76_RS08440 0.32 +0.2 1,787,020 + BWI76_RS08440 0.32 -0.5 1,787,020 + BWI76_RS08440 0.32 +1.5 1,787,020 + BWI76_RS08440 0.32 -0.1 1,787,020 + BWI76_RS08440 0.32 -1.7 1,787,020 + BWI76_RS08440 0.32 -0.2 1,787,020 + BWI76_RS08440 0.32 -0.0 1,787,020 + BWI76_RS08440 0.32 -0.6 1,787,020 + BWI76_RS08440 0.32 +0.8 1,787,020 + BWI76_RS08440 0.32 +0.1 1,787,021 - BWI76_RS08440 0.32 -2.0 1,787,026 + BWI76_RS08440 0.32 -0.1 1,787,028 - BWI76_RS08440 0.33 +0.9 1,787,028 - -0.5 1,787,028 - BWI76_RS08440 0.33 +0.3 1,787,028 - BWI76_RS08440 0.33 +0.1 1,787,028 - BWI76_RS08440 0.33 +0.2 1,787,028 - BWI76_RS08440 0.33 -1.1 1,787,028 - BWI76_RS08440 0.33 +1.5 1,787,028 - BWI76_RS08440 0.33 +2.8 1,787,028 - BWI76_RS08440 0.33 -0.0 1,787,028 - BWI76_RS08440 0.33 -0.8 1,787,028 - BWI76_RS08440 0.33 +1.1 1,787,033 + BWI76_RS08440 0.33 +0.2 1,787,038 + BWI76_RS08440 0.34 +2.1 1,787,043 + BWI76_RS08440 0.34 +0.1 1,787,046 - BWI76_RS08440 0.35 +0.3 1,787,046 - BWI76_RS08440 0.35 +0.5 1,787,051 - BWI76_RS08440 0.35 -0.5 1,787,053 + BWI76_RS08440 0.35 +0.6 1,787,053 + BWI76_RS08440 0.35 +0.0 1,787,053 + BWI76_RS08440 0.35 +0.4 1,787,053 - BWI76_RS08440 0.35 +1.2 1,787,065 + BWI76_RS08440 0.37 -0.1 1,787,065 + BWI76_RS08440 0.37 +0.9 1,787,065 + BWI76_RS08440 0.37 +0.7 1,787,065 + BWI76_RS08440 0.37 +0.6 1,787,065 + BWI76_RS08440 0.37 +1.5 1,787,065 + BWI76_RS08440 0.37 +1.7 1,787,065 + BWI76_RS08440 0.37 +0.1 1,787,065 + BWI76_RS08440 0.37 +0.7 1,787,065 + BWI76_RS08440 0.37 +0.2 1,787,065 + BWI76_RS08440 0.37 +0.3 1,787,065 + BWI76_RS08440 0.37 +1.2 1,787,065 + BWI76_RS08440 0.37 +1.2 1,787,065 + BWI76_RS08440 0.37 +1.5 1,787,073 - BWI76_RS08440 0.38 +1.8 1,787,073 - -1.1 1,787,073 - BWI76_RS08440 0.38 -0.5 1,787,073 - BWI76_RS08440 0.38 +0.4 1,787,073 - BWI76_RS08440 0.38 +0.6 1,787,073 - BWI76_RS08440 0.38 +1.1 1,787,073 - BWI76_RS08440 0.38 +1.1 1,787,073 - BWI76_RS08440 0.38 +2.2 1,787,073 - BWI76_RS08440 0.38 -1.9 1,787,073 - BWI76_RS08440 0.38 +0.5 1,787,073 - BWI76_RS08440 0.38 -1.9 1,787,073 - BWI76_RS08440 0.38 +0.4 1,787,202 + BWI76_RS08440 0.52 +1.4 1,787,246 - BWI76_RS08440 0.57 -0.0 1,787,258 + BWI76_RS08440 0.58 +0.4 1,787,323 - BWI76_RS08440 0.65 +0.6 1,787,350 + BWI76_RS08440 0.68 -0.4 1,787,406 - BWI76_RS08440 0.74 +0.1 1,787,406 - BWI76_RS08440 0.74 +0.8 1,787,614 + +1.6 1,787,792 - +1.5 1,787,913 - BWI76_RS08445 0.15 -0.7 1,788,016 + BWI76_RS08445 0.32 -0.6 1,788,018 + BWI76_RS08445 0.33 +1.8 1,788,026 - BWI76_RS08445 0.34 -0.7 1,788,186 + BWI76_RS08445 0.60 +0.3 1,788,221 - BWI76_RS08445 0.66 +0.7 1,788,280 - BWI76_RS08445 0.76 -2.3 1,788,432 + -0.3 1,788,585 - +0.6
Or see this region's nucleotide sequence