Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07815 and BWI76_RS07820 are separated by 127 nucleotides BWI76_RS07820 and BWI76_RS07825 are separated by 102 nucleotides
BWI76_RS07815: BWI76_RS07815 - hypothetical protein, at 1,656,575 to 1,657,816
_RS07815
BWI76_RS07820: BWI76_RS07820 - S-methyl-5-thioribose kinase, at 1,657,944 to 1,659,143
_RS07820
BWI76_RS07825: BWI76_RS07825 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,659,246 to 1,660,274
_RS07825
Position (kb)
1657
1658
1659
1660 Strain fitness (log2 ratio)
-2
-1
0
1 at 1657.029 kb on - strand, within BWI76_RS07815 at 1657.270 kb on - strand, within BWI76_RS07815 at 1657.318 kb on + strand, within BWI76_RS07815 at 1657.363 kb on - strand, within BWI76_RS07815 at 1657.724 kb on + strand at 1657.825 kb on + strand at 1658.006 kb on + strand at 1658.024 kb on + strand at 1658.800 kb on + strand, within BWI76_RS07820 at 1658.927 kb on - strand, within BWI76_RS07820 at 1659.263 kb on - strand at 1659.270 kb on - strand at 1659.276 kb on - strand at 1659.344 kb on + strand at 1659.450 kb on + strand, within BWI76_RS07825 at 1659.536 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.831 kb on - strand, within BWI76_RS07825 at 1659.885 kb on - strand, within BWI76_RS07825 at 1659.920 kb on - strand, within BWI76_RS07825 at 1660.053 kb on - strand, within BWI76_RS07825 at 1660.136 kb on - strand, within BWI76_RS07825
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 1,657,029 - BWI76_RS07815 0.37 -0.2 1,657,270 - BWI76_RS07815 0.56 +0.2 1,657,318 + BWI76_RS07815 0.60 -2.3 1,657,363 - BWI76_RS07815 0.63 -0.5 1,657,724 + -0.1 1,657,825 + -1.0 1,658,006 + -0.1 1,658,024 + -1.4 1,658,800 + BWI76_RS07820 0.71 -0.9 1,658,927 - BWI76_RS07820 0.82 -0.4 1,659,263 - -2.4 1,659,270 - +0.1 1,659,276 - -1.0 1,659,344 + -2.7 1,659,450 + BWI76_RS07825 0.20 -0.5 1,659,536 - BWI76_RS07825 0.28 -0.5 1,659,831 - BWI76_RS07825 0.57 -0.6 1,659,831 - BWI76_RS07825 0.57 -0.7 1,659,831 - BWI76_RS07825 0.57 -0.4 1,659,885 - BWI76_RS07825 0.62 +0.0 1,659,920 - BWI76_RS07825 0.66 -0.4 1,660,053 - BWI76_RS07825 0.78 -0.8 1,660,136 - BWI76_RS07825 0.86 +0.8
Or see this region's nucleotide sequence