Experiment: KLEB24 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07160 and BWI76_RS07165 are separated by 9 nucleotides BWI76_RS07165 and BWI76_RS07170 are separated by 138 nucleotides
BWI76_RS07160: BWI76_RS07160 - MBL fold hydrolase, at 1,504,661 to 1,505,488
_RS07160
BWI76_RS07165: BWI76_RS07165 - hypothetical protein, at 1,505,498 to 1,506,040
_RS07165
BWI76_RS07170: BWI76_RS07170 - LysR family transcriptional regulator, at 1,506,179 to 1,507,054
_RS07170
Position (kb)
1505
1506
1507 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1504.587 kb on + strand at 1504.587 kb on + strand at 1504.633 kb on + strand at 1504.660 kb on - strand at 1504.675 kb on + strand at 1504.700 kb on + strand at 1504.712 kb on + strand at 1504.720 kb on - strand at 1504.799 kb on + strand, within BWI76_RS07160 at 1504.802 kb on - strand, within BWI76_RS07160 at 1504.802 kb on - strand, within BWI76_RS07160 at 1504.941 kb on - strand, within BWI76_RS07160 at 1505.289 kb on + strand, within BWI76_RS07160 at 1505.831 kb on - strand, within BWI76_RS07165 at 1505.861 kb on + strand, within BWI76_RS07165 at 1506.224 kb on - strand at 1506.570 kb on + strand, within BWI76_RS07170 at 1506.685 kb on + strand, within BWI76_RS07170 at 1506.786 kb on - strand at 1506.791 kb on - strand, within BWI76_RS07170 at 1506.831 kb on - strand, within BWI76_RS07170 at 1506.845 kb on - strand, within BWI76_RS07170 at 1506.866 kb on - strand, within BWI76_RS07170 at 1506.945 kb on + strand, within BWI76_RS07170 at 1507.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB24 MOI 1 remove 1,504,587 + -1.5 1,504,587 + +0.4 1,504,633 + -0.3 1,504,660 - -0.4 1,504,675 + -1.0 1,504,700 + -0.7 1,504,712 + +0.0 1,504,720 - -0.6 1,504,799 + BWI76_RS07160 0.17 +0.2 1,504,802 - BWI76_RS07160 0.17 +0.0 1,504,802 - BWI76_RS07160 0.17 -0.4 1,504,941 - BWI76_RS07160 0.34 -4.0 1,505,289 + BWI76_RS07160 0.76 +0.3 1,505,831 - BWI76_RS07165 0.61 -2.7 1,505,861 + BWI76_RS07165 0.67 -0.2 1,506,224 - -0.3 1,506,570 + BWI76_RS07170 0.45 +0.1 1,506,685 + BWI76_RS07170 0.58 +1.1 1,506,786 - +0.2 1,506,791 - BWI76_RS07170 0.70 +0.1 1,506,831 - BWI76_RS07170 0.74 -0.5 1,506,845 - BWI76_RS07170 0.76 +0.3 1,506,866 - BWI76_RS07170 0.78 -0.3 1,506,945 + BWI76_RS07170 0.87 -0.3 1,507,002 - -0.4
Or see this region's nucleotide sequence