Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05730

Experiment: KLEB24 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB24 MOI 1
1,205,533	+		BWI76_RS05725	0.63	+1.2
1,205,625	-		BWI76_RS05725	0.70	-1.8
1,205,625	-		BWI76_RS05725	0.70	-0.1
1,205,643	-		BWI76_RS05725	0.72	-0.3
1,205,684	-		BWI76_RS05725	0.75	+0.5
1,205,721	-		BWI76_RS05725	0.78	-0.4
1,205,723	+		BWI76_RS05725	0.78	+0.3
1,205,742	-		BWI76_RS05725	0.79	+0.0
1,205,775	+		BWI76_RS05725	0.82	-0.8
1,205,782	+		BWI76_RS05725	0.82	+0.6
1,205,809	+		BWI76_RS05725	0.85	-1.1
1,205,825	+		BWI76_RS05725	0.86	-1.9
1,205,838	+		BWI76_RS05725	0.87	-0.3
1,205,876	-		BWI76_RS05725	0.90	-0.3
1,205,885	-				-0.4
1,205,888	+				-0.5
1,205,888	+				-1.5
1,205,889	+				-2.1
1,205,897	-				-1.0
1,205,912	-				-0.5
1,205,916	+				-0.5
1,205,924	+				+1.0
1,205,924	+				-0.1
1,205,932	-				+0.0
1,205,932	-				+1.5
1,205,932	-				-3.1
1,205,932	-				+2.5
1,205,932	-				-0.0
1,205,932	-				-0.8
1,205,932	-				-1.3
1,205,949	+				-1.4
1,205,957	-				+1.5
1,205,957	-				-0.5
1,205,978	+				+0.5
1,206,021	-				-1.4
1,206,039	+				-0.7
1,206,047	+				+0.7
1,206,047	-				-1.5
1,206,049	+				-0.2
1,206,049	+				+0.0
1,206,049	+				-0.1
1,206,057	-				-2.9
1,206,092	+				-1.0
1,206,134	+				-0.4
1,206,145	+				-0.5
1,206,150	-				-0.5
1,206,152	+				-0.7
1,206,153	-				+0.0
1,206,170	-				-0.1
1,206,173	-				+0.2
1,206,180	-				-1.0
1,206,198	+				-0.6
1,206,208	+				-0.3
1,206,208	+				-0.5
1,206,208	+				-1.5
1,206,208	+				+0.4
1,206,208	+				-0.5
1,206,214	-				+0.5
1,206,214	-				+0.5
1,206,214	-				-1.3
1,206,216	-				-0.2
1,206,216	-				-1.3
1,206,216	-				-0.0
1,206,216	-				-1.4
1,206,216	-				-0.4
1,206,221	-				-0.2
1,206,270	-				+0.1
1,206,299	-				+1.0
1,206,303	+				-0.5
1,206,303	+				-2.5
1,206,311	-				-0.7
1,206,311	-				-1.0
1,206,311	-				+0.5
1,206,313	+				+0.6
1,206,329	-				-0.5
1,206,375	-				+1.4
1,206,402	-				+0.2
1,206,426	+				-0.7
1,206,426	+				+0.9
1,206,431	+				-0.9
1,206,434	-				-0.3
1,206,458	+				-0.1
1,206,458	+				-0.6
1,206,458	+				-0.1
1,206,458	+				-0.7
1,206,463	-				-1.1
1,206,466	-				-0.5
1,206,468	+				-0.5
1,206,471	-				+1.3
1,206,471	-				-1.5
1,206,518	-				+0.6
1,206,601	+		BWI76_RS05730	0.19	-2.0
1,206,601	+		BWI76_RS05730	0.19	-1.3
1,206,780	+		BWI76_RS05730	0.43	-0.1
1,206,780	+		BWI76_RS05730	0.43	+0.2
1,206,788	-		BWI76_RS05730	0.44	-1.5
1,206,893	-		BWI76_RS05730	0.58	+0.1
1,206,919	+		BWI76_RS05730	0.61	-2.0
1,206,919	+		BWI76_RS05730	0.61	-0.0
1,206,924	+		BWI76_RS05730	0.62	-2.1
1,206,995	+		BWI76_RS05730	0.71	-1.6
1,207,021	+		BWI76_RS05730	0.75	-0.6
1,207,021	+		BWI76_RS05730	0.75	-1.1
1,207,021	+		BWI76_RS05730	0.75	-0.5
1,207,029	-		BWI76_RS05730	0.76	-1.1
1,207,050	+		BWI76_RS05730	0.79	-0.1
1,207,050	+		BWI76_RS05730	0.79	-1.4
1,207,060	-		BWI76_RS05730	0.80	+0.2
1,207,101	-		BWI76_RS05730	0.86	-0.5
1,207,102	+		BWI76_RS05730	0.86	+0.5
1,207,110	-		BWI76_RS05730	0.87	-1.2
1,207,235	+				-0.5
1,207,241	+				-0.5
1,207,248	+				-0.8
1,207,256	-				-1.0
1,207,373	+		BWI76_RS05735	0.18	-0.3
1,207,449	+		BWI76_RS05735	0.38	+1.0
1,207,503	+		BWI76_RS05735	0.53	+1.1
1,207,503	+		BWI76_RS05735	0.53	-2.3
1,207,511	-		BWI76_RS05735	0.55	-1.1
1,207,551	-		BWI76_RS05735	0.66	-0.2
1,207,556	+		BWI76_RS05735	0.67	-1.4
1,207,566	+		BWI76_RS05735	0.70	-1.2
1,207,586	+		BWI76_RS05735	0.76	+1.9
1,207,588	+		BWI76_RS05735	0.76	-0.7
1,207,593	+		BWI76_RS05735	0.78	-1.0
1,207,598	+		BWI76_RS05735	0.79	-0.4
1,207,598	+		BWI76_RS05735	0.79	-1.0
1,207,598	+		BWI76_RS05735	0.79	-1.9
1,207,601	-		BWI76_RS05735	0.80	-0.3
1,207,603	+		BWI76_RS05735	0.80	-1.0
1,207,606	-		BWI76_RS05735	0.81	-0.5
1,207,618	-		BWI76_RS05735	0.84	+0.2
1,207,654	+				-2.0
1,207,659	+				-1.0
1,207,659	+				-0.6
1,207,667	-				+1.1
1,207,667	-				+0.2
1,207,667	-				-1.4
1,207,678	-				-0.9
1,207,701	-		BWI76_RS05740	0.16	-0.6
1,207,744	+		BWI76_RS05740	0.35	-0.3
1,207,768	+		BWI76_RS05740	0.45	+1.2
1,207,775	+		BWI76_RS05740	0.48	+0.2
1,207,775	+		BWI76_RS05740	0.48	-0.6
1,207,811	-		BWI76_RS05740	0.63	-0.1
1,207,839	-		BWI76_RS05740	0.75	-0.1
1,207,839	-		BWI76_RS05740	0.75	-1.6
1,208,008	+				-0.7