Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26780 and BWI76_RS26785 are separated by 10 nucleotides BWI76_RS26785 and BWI76_RS26790 overlap by 4 nucleotides BWI76_RS26790 and BWI76_RS26795 are separated by 11 nucleotides
BWI76_RS26780: BWI76_RS26780 - cellulose synthase regulator BcsB, at 5,550,955 to 5,553,288
_RS26780
BWI76_RS26785: BWI76_RS26785 - UDP-forming cellulose synthase catalytic subunit, at 5,553,299 to 5,555,917
_RS26785
BWI76_RS26790: BWI76_RS26790 - cell division protein, at 5,555,914 to 5,556,651
_RS26790
BWI76_RS26795: BWI76_RS26795 - hypothetical protein, at 5,556,663 to 5,556,851
_RS26795
Position (kb) 5553
5554
5555
5556 Strain fitness (log2 ratio) -1
0
1
2
3 at 5552.797 kb on - strand, within BWI76_RS26780 at 5552.936 kb on - strand, within BWI76_RS26780 at 5553.030 kb on + strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.038 kb on - strand, within BWI76_RS26780 at 5553.048 kb on - strand, within BWI76_RS26780 at 5553.055 kb on - strand at 5553.370 kb on + strand at 5553.442 kb on + strand at 5553.510 kb on + strand at 5553.510 kb on + strand at 5553.549 kb on + strand at 5553.598 kb on + strand, within BWI76_RS26785 at 5553.626 kb on - strand, within BWI76_RS26785 at 5553.648 kb on + strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.767 kb on - strand, within BWI76_RS26785 at 5553.846 kb on - strand, within BWI76_RS26785 at 5553.859 kb on + strand, within BWI76_RS26785 at 5553.966 kb on - strand, within BWI76_RS26785 at 5554.076 kb on - strand, within BWI76_RS26785 at 5554.083 kb on + strand, within BWI76_RS26785 at 5554.113 kb on + strand, within BWI76_RS26785 at 5554.124 kb on - strand, within BWI76_RS26785 at 5554.132 kb on - strand, within BWI76_RS26785 at 5554.180 kb on - strand, within BWI76_RS26785 at 5554.190 kb on + strand, within BWI76_RS26785 at 5554.661 kb on + strand, within BWI76_RS26785 at 5554.663 kb on - strand, within BWI76_RS26785 at 5554.793 kb on + strand, within BWI76_RS26785 at 5554.926 kb on + strand, within BWI76_RS26785 at 5555.042 kb on - strand, within BWI76_RS26785 at 5555.117 kb on - strand, within BWI76_RS26785 at 5555.117 kb on - strand, within BWI76_RS26785 at 5555.184 kb on + strand, within BWI76_RS26785 at 5555.265 kb on - strand, within BWI76_RS26785 at 5555.372 kb on - strand, within BWI76_RS26785 at 5555.413 kb on + strand, within BWI76_RS26785 at 5555.418 kb on + strand, within BWI76_RS26785 at 5555.421 kb on - strand, within BWI76_RS26785 at 5555.421 kb on - strand, within BWI76_RS26785 at 5555.426 kb on - strand, within BWI76_RS26785 at 5555.428 kb on + strand, within BWI76_RS26785 at 5555.503 kb on + strand, within BWI76_RS26785 at 5555.532 kb on + strand, within BWI76_RS26785 at 5555.669 kb on - strand at 5555.869 kb on + strand at 5555.938 kb on + strand at 5556.040 kb on + strand, within BWI76_RS26790 at 5556.222 kb on + strand, within BWI76_RS26790 at 5556.329 kb on + strand, within BWI76_RS26790 at 5556.361 kb on - strand, within BWI76_RS26790 at 5556.425 kb on + strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.433 kb on - strand, within BWI76_RS26790 at 5556.435 kb on + strand, within BWI76_RS26790 at 5556.443 kb on - strand, within BWI76_RS26790 at 5556.467 kb on - strand, within BWI76_RS26790 at 5556.533 kb on + strand, within BWI76_RS26790 at 5556.537 kb on - strand, within BWI76_RS26790 at 5556.578 kb on + strand at 5556.578 kb on + strand at 5556.586 kb on - strand at 5556.586 kb on - strand at 5556.586 kb on - strand at 5556.591 kb on - strand at 5556.620 kb on - strand at 5556.689 kb on + strand, within BWI76_RS26795 at 5556.700 kb on + strand, within BWI76_RS26795 at 5556.708 kb on - strand, within BWI76_RS26795 at 5556.712 kb on + strand, within BWI76_RS26795 at 5556.720 kb on - strand, within BWI76_RS26795 at 5556.720 kb on - strand, within BWI76_RS26795 at 5556.761 kb on + strand, within BWI76_RS26795 at 5556.769 kb on - strand, within BWI76_RS26795 at 5556.774 kb on + strand, within BWI76_RS26795 at 5556.774 kb on + strand, within BWI76_RS26795 at 5556.782 kb on - strand, within BWI76_RS26795 at 5556.782 kb on - strand, within BWI76_RS26795 at 5556.802 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.807 kb on + strand, within BWI76_RS26795 at 5556.809 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.810 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.815 kb on - strand, within BWI76_RS26795 at 5556.820 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.822 kb on + strand, within BWI76_RS26795 at 5556.823 kb on - strand, within BWI76_RS26795 at 5556.825 kb on + strand at 5556.825 kb on + strand, within BWI76_RS26795 at 5556.830 kb on + strand, within BWI76_RS26795 at 5556.830 kb on + strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.830 kb on - strand, within BWI76_RS26795 at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.833 kb on - strand at 5556.847 kb on - strand at 5556.899 kb on - strand at 5556.905 kb on - strand at 5556.905 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 5,552,797 - BWI76_RS26780 0.79 +0.3 5,552,936 - BWI76_RS26780 0.85 +0.6 5,553,030 + BWI76_RS26780 0.89 +0.6 5,553,038 - BWI76_RS26780 0.89 +0.9 5,553,038 - BWI76_RS26780 0.89 +0.6 5,553,048 - BWI76_RS26780 0.90 +1.1 5,553,055 - +0.6 5,553,370 + +0.6 5,553,442 + +0.8 5,553,510 + +1.0 5,553,510 + +0.6 5,553,549 + +0.3 5,553,598 + BWI76_RS26785 0.11 +0.8 5,553,626 - BWI76_RS26785 0.12 +1.6 5,553,648 + BWI76_RS26785 0.13 +0.9 5,553,767 - BWI76_RS26785 0.18 +1.8 5,553,767 - BWI76_RS26785 0.18 -0.7 5,553,846 - BWI76_RS26785 0.21 +0.6 5,553,859 + BWI76_RS26785 0.21 +0.5 5,553,966 - BWI76_RS26785 0.25 +2.5 5,554,076 - BWI76_RS26785 0.30 +0.2 5,554,083 + BWI76_RS26785 0.30 +1.6 5,554,113 + BWI76_RS26785 0.31 +1.2 5,554,124 - BWI76_RS26785 0.32 +1.6 5,554,132 - BWI76_RS26785 0.32 +0.5 5,554,180 - BWI76_RS26785 0.34 +1.3 5,554,190 + BWI76_RS26785 0.34 +0.5 5,554,661 + BWI76_RS26785 0.52 +0.9 5,554,663 - BWI76_RS26785 0.52 +1.3 5,554,793 + BWI76_RS26785 0.57 +1.1 5,554,926 + BWI76_RS26785 0.62 +0.1 5,555,042 - BWI76_RS26785 0.67 +0.6 5,555,117 - BWI76_RS26785 0.69 +1.6 5,555,117 - BWI76_RS26785 0.69 +0.9 5,555,184 + BWI76_RS26785 0.72 +0.6 5,555,265 - BWI76_RS26785 0.75 +0.7 5,555,372 - BWI76_RS26785 0.79 +0.5 5,555,413 + BWI76_RS26785 0.81 +1.3 5,555,418 + BWI76_RS26785 0.81 +1.1 5,555,421 - BWI76_RS26785 0.81 +0.8 5,555,421 - BWI76_RS26785 0.81 +0.9 5,555,426 - BWI76_RS26785 0.81 +0.9 5,555,428 + BWI76_RS26785 0.81 +2.1 5,555,503 + BWI76_RS26785 0.84 +1.9 5,555,532 + BWI76_RS26785 0.85 +1.3 5,555,669 - +0.2 5,555,869 + +0.8 5,555,938 + +0.5 5,556,040 + BWI76_RS26790 0.17 +1.0 5,556,222 + BWI76_RS26790 0.42 +1.5 5,556,329 + BWI76_RS26790 0.56 +0.5 5,556,361 - BWI76_RS26790 0.61 +1.3 5,556,425 + BWI76_RS26790 0.69 +1.2 5,556,433 - BWI76_RS26790 0.70 +1.0 5,556,433 - BWI76_RS26790 0.70 +1.2 5,556,433 - BWI76_RS26790 0.70 +1.3 5,556,433 - BWI76_RS26790 0.70 +0.5 5,556,435 + BWI76_RS26790 0.71 +0.9 5,556,443 - BWI76_RS26790 0.72 -0.3 5,556,467 - BWI76_RS26790 0.75 +0.0 5,556,533 + BWI76_RS26790 0.84 +0.7 5,556,537 - BWI76_RS26790 0.84 +0.7 5,556,578 + +0.3 5,556,578 + +0.7 5,556,586 - +0.5 5,556,586 - +1.1 5,556,586 - +1.2 5,556,591 - +0.8 5,556,620 - +0.7 5,556,689 + BWI76_RS26795 0.14 +1.2 5,556,700 + BWI76_RS26795 0.20 +1.8 5,556,708 - BWI76_RS26795 0.24 +0.3 5,556,712 + BWI76_RS26795 0.26 +0.8 5,556,720 - BWI76_RS26795 0.30 +3.3 5,556,720 - BWI76_RS26795 0.30 +0.9 5,556,761 + BWI76_RS26795 0.52 +1.1 5,556,769 - BWI76_RS26795 0.56 +0.2 5,556,774 + BWI76_RS26795 0.59 +0.2 5,556,774 + BWI76_RS26795 0.59 +1.2 5,556,782 - BWI76_RS26795 0.63 +3.4 5,556,782 - BWI76_RS26795 0.63 +0.3 5,556,802 + BWI76_RS26795 0.74 +0.9 5,556,807 + BWI76_RS26795 0.76 +0.9 5,556,807 + BWI76_RS26795 0.76 +0.2 5,556,807 + BWI76_RS26795 0.76 +2.3 5,556,807 + BWI76_RS26795 0.76 +0.9 5,556,809 - BWI76_RS26795 0.77 +0.4 5,556,810 - BWI76_RS26795 0.78 -0.4 5,556,810 - BWI76_RS26795 0.78 +1.3 5,556,810 - BWI76_RS26795 0.78 -0.1 5,556,810 - BWI76_RS26795 0.78 +0.5 5,556,810 - BWI76_RS26795 0.78 +0.6 5,556,810 - BWI76_RS26795 0.78 -0.1 5,556,810 - BWI76_RS26795 0.78 -0.1 5,556,810 - BWI76_RS26795 0.78 +1.3 5,556,810 - BWI76_RS26795 0.78 +0.2 5,556,810 - BWI76_RS26795 0.78 +0.5 5,556,815 - BWI76_RS26795 0.80 +0.7 5,556,815 - BWI76_RS26795 0.80 +1.2 5,556,815 - BWI76_RS26795 0.80 +1.8 5,556,815 - BWI76_RS26795 0.80 +0.6 5,556,820 + BWI76_RS26795 0.83 +1.7 5,556,822 + BWI76_RS26795 0.84 +0.6 5,556,822 + BWI76_RS26795 0.84 +2.4 5,556,822 + BWI76_RS26795 0.84 +1.1 5,556,822 + BWI76_RS26795 0.84 +0.4 5,556,823 - BWI76_RS26795 0.85 +0.4 5,556,825 + +2.3 5,556,825 + BWI76_RS26795 0.86 +1.5 5,556,830 + BWI76_RS26795 0.88 +1.2 5,556,830 + BWI76_RS26795 0.88 +1.4 5,556,830 - BWI76_RS26795 0.88 +0.5 5,556,830 - BWI76_RS26795 0.88 +0.4 5,556,830 - BWI76_RS26795 0.88 +1.1 5,556,830 - BWI76_RS26795 0.88 +1.1 5,556,830 - BWI76_RS26795 0.88 +0.9 5,556,833 - +2.3 5,556,833 - -0.1 5,556,833 - -0.1 5,556,833 - -0.4 5,556,847 - +0.9 5,556,899 - -0.7 5,556,905 - +0.2 5,556,905 - +1.0
Or see this region's nucleotide sequence