Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22500 and BWI76_RS22505 are separated by 26 nucleotides BWI76_RS22505 and BWI76_RS22510 are separated by 1 nucleotides BWI76_RS22510 and BWI76_RS22515 are separated by 16 nucleotides BWI76_RS22515 and BWI76_RS22520 overlap by 4 nucleotides
BWI76_RS22500: BWI76_RS22500 - phosphohydrolase, at 4,690,383 to 4,691,648
_RS22500
BWI76_RS22505: BWI76_RS22505 - 3-oxoacyl-ACP reductase, at 4,691,675 to 4,692,406
_RS22505
BWI76_RS22510: BWI76_RS22510 - hypothetical protein, at 4,692,408 to 4,692,659
_RS22510
BWI76_RS22515: BWI76_RS22515 - acyl dehydratase, at 4,692,676 to 4,693,482
_RS22515
BWI76_RS22520: BWI76_RS22520 - 3-oxoacyl-ACP synthase, at 4,693,479 to 4,694,732
_RS22520
Position (kb) 4692
4693 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4691.411 kb on + strand, within BWI76_RS22500 at 4691.419 kb on - strand, within BWI76_RS22500 at 4691.419 kb on - strand, within BWI76_RS22500 at 4691.419 kb on - strand, within BWI76_RS22500 at 4691.435 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.437 kb on + strand, within BWI76_RS22500 at 4691.442 kb on + strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.445 kb on - strand at 4691.445 kb on - strand, within BWI76_RS22500 at 4691.459 kb on + strand, within BWI76_RS22500 at 4691.536 kb on + strand at 4691.544 kb on - strand at 4691.548 kb on - strand at 4691.584 kb on + strand at 4691.592 kb on - strand at 4691.592 kb on - strand at 4691.641 kb on - strand at 4691.641 kb on - strand at 4691.643 kb on + strand at 4691.643 kb on + strand at 4691.643 kb on + strand at 4691.650 kb on + strand at 4691.651 kb on - strand at 4691.651 kb on - strand at 4691.651 kb on - strand at 4691.657 kb on - strand at 4691.658 kb on - strand at 4691.658 kb on - strand at 4691.679 kb on - strand at 4691.698 kb on + strand at 4691.701 kb on - strand at 4691.704 kb on + strand at 4691.704 kb on + strand at 4691.712 kb on - strand at 4691.719 kb on + strand at 4691.723 kb on - strand at 4691.723 kb on - strand at 4691.756 kb on + strand, within BWI76_RS22505 at 4691.784 kb on - strand, within BWI76_RS22505 at 4691.784 kb on - strand, within BWI76_RS22505 at 4691.784 kb on - strand, within BWI76_RS22505 at 4691.975 kb on + strand, within BWI76_RS22505 at 4691.983 kb on - strand, within BWI76_RS22505 at 4691.983 kb on - strand, within BWI76_RS22505 at 4692.044 kb on - strand, within BWI76_RS22505 at 4692.127 kb on - strand, within BWI76_RS22505 at 4692.244 kb on - strand, within BWI76_RS22505 at 4692.422 kb on + strand at 4692.441 kb on - strand, within BWI76_RS22510 at 4692.950 kb on - strand, within BWI76_RS22515 at 4693.031 kb on - strand, within BWI76_RS22515 at 4693.172 kb on - strand, within BWI76_RS22515 at 4693.292 kb on - strand, within BWI76_RS22515 at 4693.462 kb on + strand at 4693.462 kb on + strand at 4693.554 kb on - strand at 4693.609 kb on - strand, within BWI76_RS22520 at 4693.609 kb on - strand, within BWI76_RS22520 at 4693.645 kb on + strand, within BWI76_RS22520
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 4,691,411 + BWI76_RS22500 0.81 -0.9 4,691,419 - BWI76_RS22500 0.82 +0.5 4,691,419 - BWI76_RS22500 0.82 -0.6 4,691,419 - BWI76_RS22500 0.82 +0.6 4,691,435 + BWI76_RS22500 0.83 +2.2 4,691,437 + BWI76_RS22500 0.83 -0.7 4,691,437 + BWI76_RS22500 0.83 +0.4 4,691,437 + BWI76_RS22500 0.83 -0.0 4,691,437 + BWI76_RS22500 0.83 -0.4 4,691,437 + BWI76_RS22500 0.83 -1.6 4,691,437 + BWI76_RS22500 0.83 +0.9 4,691,437 + BWI76_RS22500 0.83 -0.1 4,691,437 + BWI76_RS22500 0.83 -1.3 4,691,437 + BWI76_RS22500 0.83 -0.6 4,691,437 + BWI76_RS22500 0.83 -0.4 4,691,442 + BWI76_RS22500 0.84 -0.2 4,691,445 - BWI76_RS22500 0.84 -0.6 4,691,445 - BWI76_RS22500 0.84 +1.8 4,691,445 - BWI76_RS22500 0.84 -0.5 4,691,445 - BWI76_RS22500 0.84 +0.6 4,691,445 - BWI76_RS22500 0.84 -2.2 4,691,445 - BWI76_RS22500 0.84 -1.4 4,691,445 - BWI76_RS22500 0.84 +1.1 4,691,445 - BWI76_RS22500 0.84 -1.9 4,691,445 - BWI76_RS22500 0.84 +0.2 4,691,445 - -0.6 4,691,445 - BWI76_RS22500 0.84 -0.4 4,691,445 - BWI76_RS22500 0.84 -0.0 4,691,445 - -0.2 4,691,445 - BWI76_RS22500 0.84 +0.1 4,691,459 + BWI76_RS22500 0.85 +0.8 4,691,536 + -1.0 4,691,544 - -0.1 4,691,548 - +0.4 4,691,584 + -1.6 4,691,592 - -0.6 4,691,592 - +0.0 4,691,641 - +0.1 4,691,641 - -0.0 4,691,643 + +0.3 4,691,643 + +0.4 4,691,643 + +1.1 4,691,650 + -0.6 4,691,651 - +0.7 4,691,651 - +0.2 4,691,651 - +1.1 4,691,657 - -0.6 4,691,658 - +0.2 4,691,658 - -0.4 4,691,679 - -0.3 4,691,698 + +0.1 4,691,701 - -0.7 4,691,704 + +0.6 4,691,704 + -0.2 4,691,712 - +1.3 4,691,719 + +1.6 4,691,723 - +0.1 4,691,723 - -0.5 4,691,756 + BWI76_RS22505 0.11 +1.3 4,691,784 - BWI76_RS22505 0.15 -0.4 4,691,784 - BWI76_RS22505 0.15 -0.2 4,691,784 - BWI76_RS22505 0.15 +0.9 4,691,975 + BWI76_RS22505 0.41 -0.0 4,691,983 - BWI76_RS22505 0.42 -0.2 4,691,983 - BWI76_RS22505 0.42 -0.4 4,692,044 - BWI76_RS22505 0.50 -0.6 4,692,127 - BWI76_RS22505 0.62 -0.5 4,692,244 - BWI76_RS22505 0.78 -0.7 4,692,422 + +0.7 4,692,441 - BWI76_RS22510 0.13 -0.7 4,692,950 - BWI76_RS22515 0.34 -0.3 4,693,031 - BWI76_RS22515 0.44 -0.2 4,693,172 - BWI76_RS22515 0.61 +1.4 4,693,292 - BWI76_RS22515 0.76 -0.3 4,693,462 + -0.3 4,693,462 + +0.5 4,693,554 - +1.0 4,693,609 - BWI76_RS22520 0.10 +0.9 4,693,609 - BWI76_RS22520 0.10 +0.5 4,693,645 + BWI76_RS22520 0.13 +0.1
Or see this region's nucleotide sequence