Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17465 and BWI76_RS17470 are separated by 0 nucleotides BWI76_RS17470 and BWI76_RS17475 are separated by 210 nucleotides BWI76_RS17475 and BWI76_RS17480 are separated by 272 nucleotides
BWI76_RS17465: BWI76_RS17465 - C4-dicarboxylic acid transporter DauA, at 3,621,017 to 3,622,696
_RS17465
BWI76_RS17470: BWI76_RS17470 - MerR family transcriptional regulator, at 3,622,697 to 3,623,743
_RS17470
BWI76_RS17475: BWI76_RS17475 - membrane protein, at 3,623,954 to 3,624,229
_RS17475
BWI76_RS17480: BWI76_RS17480 - aminoacyl-tRNA hydrolase, at 3,624,502 to 3,625,086
_RS17480
Position (kb) 3622
3623
3624 Strain fitness (log2 ratio) -1
0
1 at 3621.834 kb on - strand, within BWI76_RS17465 at 3622.577 kb on - strand at 3622.577 kb on - strand at 3622.747 kb on + strand at 3622.773 kb on - strand at 3623.299 kb on + strand, within BWI76_RS17470 at 3623.597 kb on - strand, within BWI76_RS17470 at 3623.822 kb on + strand at 3624.178 kb on + strand, within BWI76_RS17475
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 3,621,834 - BWI76_RS17465 0.49 +0.1 3,622,577 - +0.6 3,622,577 - -0.6 3,622,747 + +0.1 3,622,773 - +1.1 3,623,299 + BWI76_RS17470 0.57 -0.9 3,623,597 - BWI76_RS17470 0.86 -0.6 3,623,822 + -0.6 3,624,178 + BWI76_RS17475 0.81 +0.4
Or see this region's nucleotide sequence