Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15590 and BWI76_RS15595 are separated by 59 nucleotides BWI76_RS15595 and BWI76_RS15600 are separated by 58 nucleotides BWI76_RS15600 and BWI76_RS15605 overlap by 4 nucleotides BWI76_RS15605 and BWI76_RS15610 are separated by 2 nucleotides BWI76_RS15610 and BWI76_RS15615 are separated by 2 nucleotides BWI76_RS15615 and BWI76_RS15620 overlap by 1 nucleotides
BWI76_RS15590: BWI76_RS15590 - hypothetical protein, at 3,263,250 to 3,263,957
_RS15590
BWI76_RS15595: BWI76_RS15595 - hypothetical protein, at 3,264,017 to 3,264,781
_RS15595
BWI76_RS15600: BWI76_RS15600 - hypothetical protein, at 3,264,840 to 3,265,223
_RS15600
BWI76_RS15605: BWI76_RS15605 - hypothetical protein, at 3,265,220 to 3,265,588
_RS15605
BWI76_RS15610: BWI76_RS15610 - hypothetical protein, at 3,265,591 to 3,265,953
_RS15610
BWI76_RS15615: BWI76_RS15615 - hypothetical protein, at 3,265,956 to 3,266,126
_RS15615
BWI76_RS15620: BWI76_RS15620 - hypothetical protein, at 3,266,126 to 3,266,527
_RS15620
Position (kb) 3264
3265
3266 Strain fitness (log2 ratio) -1
0
1
2 at 3264.104 kb on - strand, within BWI76_RS15595 at 3264.185 kb on + strand, within BWI76_RS15595 at 3264.185 kb on + strand, within BWI76_RS15595 at 3264.312 kb on + strand, within BWI76_RS15595 at 3264.444 kb on - strand, within BWI76_RS15595 at 3264.675 kb on - strand, within BWI76_RS15595 at 3264.713 kb on + strand at 3264.721 kb on - strand at 3264.721 kb on - strand at 3264.721 kb on - strand at 3264.721 kb on - strand at 3264.781 kb on - strand at 3264.869 kb on + strand at 3264.898 kb on + strand, within BWI76_RS15600 at 3265.209 kb on + strand at 3265.292 kb on - strand, within BWI76_RS15605 at 3265.517 kb on - strand, within BWI76_RS15605 at 3266.131 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 3,264,104 - BWI76_RS15595 0.11 +0.2 3,264,185 + BWI76_RS15595 0.22 -0.5 3,264,185 + BWI76_RS15595 0.22 -0.5 3,264,312 + BWI76_RS15595 0.39 +0.9 3,264,444 - BWI76_RS15595 0.56 -0.3 3,264,675 - BWI76_RS15595 0.86 +0.1 3,264,713 + -1.4 3,264,721 - -0.1 3,264,721 - +0.3 3,264,721 - -0.4 3,264,721 - +0.3 3,264,781 - +0.2 3,264,869 + -0.3 3,264,898 + BWI76_RS15600 0.15 -0.6 3,265,209 + +0.3 3,265,292 - BWI76_RS15605 0.20 -0.7 3,265,517 - BWI76_RS15605 0.80 -0.2 3,266,131 - +1.9
Or see this region's nucleotide sequence