Experiment: KLEB29 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14055 and BWI76_RS14060 are separated by 168 nucleotides BWI76_RS14060 and BWI76_RS14065 are separated by 338 nucleotides BWI76_RS14065 and BWI76_RS14070 are separated by 5 nucleotides
BWI76_RS14055: BWI76_RS14055 - LacI family transcriptional regulator, at 2,937,277 to 2,938,311
_RS14055
BWI76_RS14060: BWI76_RS14060 - secretory lipase, at 2,938,480 to 2,939,622
_RS14060
BWI76_RS14065: BWI76_RS14065 - hypothetical protein, at 2,939,961 to 2,940,386
_RS14065
BWI76_RS14070: BWI76_RS14070 - ECF subfamily RNA polymerase sigma-24 subunit, at 2,940,392 to 2,940,952
_RS14070
Position (kb)
2938
2939
2940 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2937.617 kb on - strand, within BWI76_RS14055 at 2937.626 kb on + strand, within BWI76_RS14055 at 2937.671 kb on - strand at 2937.853 kb on + strand, within BWI76_RS14055 at 2937.856 kb on + strand, within BWI76_RS14055 at 2937.863 kb on - strand, within BWI76_RS14055 at 2937.888 kb on - strand, within BWI76_RS14055 at 2938.249 kb on - strand at 2938.421 kb on + strand at 2938.452 kb on - strand at 2938.492 kb on - strand at 2938.525 kb on - strand at 2938.801 kb on - strand, within BWI76_RS14060 at 2938.858 kb on - strand, within BWI76_RS14060 at 2939.004 kb on + strand, within BWI76_RS14060 at 2939.229 kb on + strand, within BWI76_RS14060 at 2939.381 kb on - strand, within BWI76_RS14060 at 2939.675 kb on - strand at 2939.823 kb on - strand at 2939.923 kb on - strand at 2939.923 kb on - strand at 2939.925 kb on + strand at 2939.933 kb on - strand at 2940.146 kb on - strand, within BWI76_RS14065 at 2940.253 kb on + strand, within BWI76_RS14065 at 2940.261 kb on - strand, within BWI76_RS14065
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB29 MOI 0.1 remove 2,937,617 - BWI76_RS14055 0.33 -0.7 2,937,626 + BWI76_RS14055 0.34 -0.8 2,937,671 - +2.8 2,937,853 + BWI76_RS14055 0.56 +1.3 2,937,856 + BWI76_RS14055 0.56 +0.1 2,937,863 - BWI76_RS14055 0.57 -0.8 2,937,888 - BWI76_RS14055 0.59 +1.3 2,938,249 - +0.9 2,938,421 + +0.8 2,938,452 - +0.1 2,938,492 - +0.8 2,938,525 - -2.3 2,938,801 - BWI76_RS14060 0.28 -2.1 2,938,858 - BWI76_RS14060 0.33 -0.1 2,939,004 + BWI76_RS14060 0.46 -0.9 2,939,229 + BWI76_RS14060 0.66 -0.5 2,939,381 - BWI76_RS14060 0.79 -0.6 2,939,675 - +0.0 2,939,823 - +0.2 2,939,923 - +0.2 2,939,923 - -0.8 2,939,925 + +1.2 2,939,933 - -0.3 2,940,146 - BWI76_RS14065 0.43 -1.7 2,940,253 + BWI76_RS14065 0.69 +0.7 2,940,261 - BWI76_RS14065 0.70 -2.3
Or see this region's nucleotide sequence